Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00397 ATGGAAAATAAGCAGTCTTTCTTCTCCGCTCTCAAAGACGAGGTCGTACGCGGCCTCTCCCCCTCGCGTTCTCGCTCCAAGAGCCCTGCCCGGACCGCCTCCCCCATTTCGGGTCTCCTCCGCCGCAAGAAGCACAACCCAGACTCCTCCGTTGCGAGATCCGCCAGTCTCCGCCCGCTTGGTGAGACGCTCACGCCTCTTATCGAGGGGCCCGACCCGGACGCCTCCGAAAACGGGGATCCCAAGCGAATCGGGTCGGGTCTCGGACACTGGATGAAGGGCCAGCTGTCACGTGCCCCCTCCGTGTCTTACAAGAGGTCTGATCTGAGACTCCTTCTCGGTGTCATGGGCGCCCCACTCGCTCCCGTTCACGTGTGCTCCACCGACCCCTTGCCTCATCTCAGCATTAAAGACACTCCCATTGAAACTTCTTCTGCCCAGTACATATTGCAGCAGTACCTAGCAGCATCTGGGGGGCTAAAGTTGCAGAACTCTATACGAAATGCTTATGCGATGGGAAAGGTTAGAATGGTGGCTTCTGAATTTGAAACTGCGACTAAGGTAGTGAAGAACCGAAATTCATCTAGGTGTGCGGAGTCTGGCGGATTCGTGCTCTGGCAGATGAATCCGGACATGTGGTATGTAGAGCTTGTAGTTGGGGGTAGCAAGGTTCATGCTGGCTGCAATGGCAAGCTTGTCTGGAGGCACACCCCTTGGCTCGGTGCTCATACGGCCAAGGGACCCGTGAGGCCTTTGCGGCGTGCTCTTCAGGTTGATTTTGTTTTAAAATTTGCAACTGCACATGTGCCGCTTGTTCCATTTTTCTCTGTAATTTCTAAGTGTGTATATTTGTTTGATCAGGGTATTGATCCTAGAACCACTGCAAGTATGTTTGCCGATGCCAGATGCATAGGAGAGAAAAACATCAATGGTGAGGATTGCTTCATCCTGAAGCTTTGTACTGACCCTGAAACATTGAAGGCTCGGAGTGAGGGTCCTGCTGAGATCATAAGGCATGTCTTGTTCGGCTACTTCAGCCAGAAGACTGGTCTTCTTGTTCACATTGAGGACTCTCATCTGACGCGCATCCAATCTAATGGGGGTGATGCAGTTTATTGGGAGACCACAATCAATTCATTCCTCGGTGATTACAAGCCTGTGGAAGGTATAATGATTGCCCACTCTGGGCATTCTGTGGTAACCCTTTTCAGGTTTGGGGAGATGGCCATGAGCCACACTAAAACAAAAATGGAAGAGGCCTGGACGATTGAAGAGGTTGCATTCAATGTACCGGGTCTTTCAGTTGATTGCTTCATTCCCCCAGCTGATTTGCGAACAGGGTCTGTAAGCGAAGCTTGTGAACTTCCTCAGGACGACAGAGGAAAAAACTCATTAGCAGTACACCGAGCCAAAGTTGTTGCACTGGAGAAATCACATAATTGCAGTATTGATAACATGATCTGGAAGATGGAAATCTAA 1479 0.5085 MENKQSFFSALKDEVVRGLSPSRSRSKSPARTASPISGLLRRKKHNPDSSVARSASLRPLGETLTPLIEGPDPDASENGDPKRIGSGLGHWMKGQLSRAPSVSYKRSDLRLLLGVMGAPLAPVHVCSTDPLPHLSIKDTPIETSSAQYILQQYLAASGGLKLQNSIRNAYAMGKVRMVASEFETATKVVKNRNSSRCAESGGFVLWQMNPDMWYVELVVGGSKVHAGCNGKLVWRHTPWLGAHTAKGPVRPLRRALQVDFVLKFATAHVPLVPFFSVISKCVYLFDQGIDPRTTASMFADARCIGEKNINGEDCFILKLCTDPETLKARSEGPAEIIRHVLFGYFSQKTGLLVHIEDSHLTRIQSNGGDAVYWETTINSFLGDYKPVEGIMIAHSGHSVVTLFRFGEMAMSHTKTKMEEAWTIEEVAFNVPGLSVDCFIPPADLRTGSVSEACELPQDDRGKNSLAVHRAKVVALEKSHNCSIDNMIWKMEI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00397 492 Pfam Protein of unknown function (DUF620) 287 441 IPR006873 -
Vian3g00397 492 Pfam Protein of unknown function (DUF620) 170 257 IPR006873 -
Vian3g00397 492 PANTHER LIPASE 62 445 IPR006873 -
Vian3g00397 492 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00397 Vian-Chr3 3762996 3765127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00397 - - gmx:100813032 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00397 3 3762996 3765127 Vian3g00397 3 3762996 3765127 ECH