Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00392 ATGGCAACCCTTTCCTCCATCATCTCCCTTTCTTCTCTTCCTCCTCTCCGTCGCCACCCTTCTCTTTCACCCTTTCCTCACTCTCTTTCTCTATCATTCTCTCGCACAAAACCTCGTTCTCCCTTTCTCCTTATTGCTTCTTCTGCCCATTCTTCCGATGATTTCACCTCCAAATCCAAGAAATCAGTGCTCACTGAGGCGATACAAGAGATAGAACCGCTGGATGTTAGCCACATCCAGAAAGATGTTCCACCAGCAACAGCGGCTGCCATGAAAAGGATTATATCTGGAATGCTGGGCCTGCTTCCATCTGATCAATTTCACGTTGTCATTGAGGCTTTGTGGGAACCCCTCTCCAAGTTGCTGATTTCTTCAATGACGACTGGGTATACGCTACGCAATGCTGAATATAGGCTTTTCCTTGAGAAAAATCTTGAAATGTTTGATATAGAGAAGCCAAAGGAAGAAACTACGAAGGTGGACTTACAAGGGTTAATGCATGACAGTGTAAATGTGATTGACTTTGGTAGAAATAGGAATTTGTCTTCCAAAGTTGAAAAGCTTCGTGAGGATGTTGACATTCAAGACCTTGGTGAAATATCTGCAGAAGCTCAGCAATATATTTTCGATTTGCAATCTCGTTTGTCTTCCATGAAAAAGGAGCTACATGAAGTAAAGAGGAAAAGTGCTGCTCTTCAAATGCAACAATTTCGGGGAGAGGAAAAGAATGATTTATTGAATTACTTGAGATCTCTTAAAACTGAACAGGTTTTCCCCTTTTCTGGAATTTCTGAAGCATTTGGACCCGCCCCTTTAGTAGCTCAGCTTTCAGAATTTTCATCCCCTGAGCTGAAGGAAATCATGCTCTCTGTTGTCCATGGTCTTCTTGCTACCCTTTCTCCTAAAATGCATTCTAAACCTTCCACCATGTCAGAAGTTGGGCCCAAAAATGTTAGAAGTGAGGATTGTGCTGAGGTTGTTGAGAACTCTGCTCTTCCTTTTCAGCCTGTTATTTCCTTGACTAGGGACTATCTTGCCCGCCTGCTGTTTTGGTGCGTGCTGCTGGGATACTATCTTAGAGGCCTGGAGTGTAGAATGGAATTGATGGATTTGCTTGACAAGTGA 1125 0.432 MATLSSIISLSSLPPLRRHPSLSPFPHSLSLSFSRTKPRSPFLLIASSAHSSDDFTSKSKKSVLTEAIQEIEPLDVSHIQKDVPPATAAAMKRIISGMLGLLPSDQFHVVIEALWEPLSKLLISSMTTGYTLRNAEYRLFLEKNLEMFDIEKPKEETTKVDLQGLMHDSVNVIDFGRNRNLSSKVEKLREDVDIQDLGEISAEAQQYIFDLQSRLSSMKKELHEVKRKSAALQMQQFRGEEKNDLLNYLRSLKTEQVFPFSGISEAFGPAPLVAQLSEFSSPELKEIMLSVVHGLLATLSPKMHSKPSTMSEVGPKNVRSEDCAEVVENSALPFQPVISLTRDYLARLLFWCVLLGYYLRGLECRMELMDLLDK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00392 374 PANTHER OS02G0833400 PROTEIN 47 373 - -
Vian3g00392 374 Pfam Protein of unknown function (DUF760) 244 372 IPR008479 -
Vian3g00392 374 Pfam Protein of unknown function (DUF760) 64 145 IPR008479 -
Vian3g00392 374 Coils Coil 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00392 Vian-Chr3 3717760 3720999 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00392 - - gmx:547534 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00392 3 3717760 3720999 Vian3g00392 3 3717760 3720999 ECH