Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00385 ATGCCAACAGCTATGAAGGTTCTTATCCACCGACTTCTGATGTCCTTCGTCTTCTCTTGCTTACTGTGTTGGGCAATGCAAGATGGAGTACGGGCTACTATGCGCAGCACCCCACAGAGTACGTGGTGGAAGCCACTTTCAACCAATGCAGGGGATGATGAGTCTCCTCCAAGGCCCTTGAAGGTTACTTTCGCTGGGCCTGCAACTCACTGGACAGATGCCATCCCCATTGGCAATGGCCGTCTCGGTGCCATGGTTTGGGGTGGCGTACCCTCCGAACTTCTCCAGCTCAATGAGGACACACTTTGGACTGGGATCCCTGGAGACTACACCAACAAAAGTGCTCCACAAGCACTGGCTGAAGTCAGAAAGCTCGTTGATGATAGAAAATTCTCTGAAGCTACCGCAGCAGCTGTCAAGTTGTCAGGAGAGCCTTCCGATGTATACCAACTTCTCGGTGATATCAAGATAGAGTTTCATGATTCCCATCTTAAATATTCAAAGGAGTCTTATTACAGGGAGCTGGATTTGGATACTGCTACCGCAAAAGTAAAATACTCTGTGGGTGATGTAGAATTTACTAGAGAGCATTTTGTTTCTAGTCCAGACCAAGTAATAGTGACAAGGTTATCTGCAAGCAAACCTGGGTCATTATCATTTACAGTGTATTTTGATAGCAAAATGCATCATGATTCAAGGATAAGTGGCCAAAATCAGATAATAATTGAAGGGAGATGTCCTGGTAGTAGGATCCGACCGAGACTGAATTCAATTGACAATCCAATGGGGATTCGGTTTTCTGCAGTTTTTGATATGCAGATTAGTAACGGGGTTATACAAGTTTTAGATGATAGGAAGCTAACAGTTGAAGGTTCAGATTCGGCTATTTTGCTTTTGACAGCTTCTTCTTCCTTTGATGGCCCATTTACTATGCCTGAAGACTCAAAGAAGGACCCTACTTCTGAGTCCCTCAGTAAAATGAAGTCCGTGAAAAGTTTTTCTTATGCTGATCTTTATGCACGACACATAGATGACTATCAAAATCTATTTCACCGCGTCTCATTGCAACTCTCTAAAAGCTCAAAGACTGTTTTGGGAAAATCTGTTTTCTTCAAAAGGCAGTCAGTTTCCTCCCAAACAAACATCTCTCAAAAGGAAGGTGACACCATTCCAACTTCAGCAAGAGTCAAATCTTTTCAAACTGATGAGGACCCTTCCTTTGTTGAGCTTTTGTTTCAATATGGTCGATATCTCCTAATCTCTTGTTCACGTCCTGGATCTCAGGTGGCAAATCTACAGGGTATCTGGAACAAAGATGTTGAGCCTGCATGGGATGGTGCTCCTCACTTGAACATTAATCTTCAAATGAATTATTGGCCAGCCCTTTCTAGCAACCTACAAGAGTGTCAAGAGCCCTTATTTGATTTCATTTCGTCTTTGTCAGCCAATGGTAAAAAAACTGCAAAGGTGAACTATGAAACAAATGGTTGGGTTGCACATCAAGTTTCTGACATATGGGCTAAAACATCACCAGATAGAGGTGAGGCTGTTTGGGCTTTATGGCCTATGGGTGGAGCTTGGCTTTGTGCCCATTTATGGGAGCATTATACTTATACAATGGACAAAGATTTTCTTAAAAATAAAGCATACCCTTTGTTGGAAGAATGTGCATCATTTTTGTTGGATTGGTTGATTGAAGGCCGTGGTGGATTATTAGAAACTAACCCATCAACTTCACCAGAGCACATGTTCACTGCACCAGACCGAAAGCCTGCTAGTGTGAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTTTTCACTATAATCATTTCTGCCGCTGAGGTTTTGGGAAGACACGATGACGCAATCATCAAAAGAGTCACTGTGTATCAGTCTAAGCTTCCTCCGACAAAACGTTCTAGAGATGGTTCCATTATGGAATGGGCAGAAGATTTTGAGGACCCAGATGTACATCATCGACATGTTTCACATCTGTTTGGACTATTTCCAGGGCACACGATTAGTCTTGAGCAAACTCCAGTCCTCTGTAAAGCTGTGGAATCTAGTCTAATTAAAAGAGGAGATGATGGCCCAGGATGGTCGACAACTTGGAAAGCTTCATTGTGGGCACATCTTCATAATAGTGAGCATGCGTATCGTATGATAAAACACTTGATTGTCTTGGTAGACCCTGATCATGAAAGTGATTACGAAGGAGGACTTTATAGCAACCTGTTCACAACACATCCCCCTTTTCAGATTGATGCTAACTTTGGTTTTTCTGGAGCAATAGCAGAAATGCTTGTTCAAAGCACAATGAAGGACCTTTACTTGCTTCCGGCATTGCCACGCGATAAATGGGCCAATGGTTGTGTGAAAGGATTGAAAGCTCGTGGCGGGGTAACAGTCAACATTTGCTGGAAAGAAGGAGATCTACTTGAAGTTGGGCTTTGGTCAGAAAAGCTGAATTCCCAAGTAAGACTACATTATAGAGGAACCGTGGTCTTAACAAGTTTATCACCTGGCAGAGTTTACTCATATAATAACCTATTGAAGTGCGTGAAGACATACTCTCTCCCTCAGAAAAATTAA 2601 0.4264 MPTAMKVLIHRLLMSFVFSCLLCWAMQDGVRATMRSTPQSTWWKPLSTNAGDDESPPRPLKVTFAGPATHWTDAIPIGNGRLGAMVWGGVPSELLQLNEDTLWTGIPGDYTNKSAPQALAEVRKLVDDRKFSEATAAAVKLSGEPSDVYQLLGDIKIEFHDSHLKYSKESYYRELDLDTATAKVKYSVGDVEFTREHFVSSPDQVIVTRLSASKPGSLSFTVYFDSKMHHDSRISGQNQIIIEGRCPGSRIRPRLNSIDNPMGIRFSAVFDMQISNGVIQVLDDRKLTVEGSDSAILLLTASSSFDGPFTMPEDSKKDPTSESLSKMKSVKSFSYADLYARHIDDYQNLFHRVSLQLSKSSKTVLGKSVFFKRQSVSSQTNISQKEGDTIPTSARVKSFQTDEDPSFVELLFQYGRYLLISCSRPGSQVANLQGIWNKDVEPAWDGAPHLNINLQMNYWPALSSNLQECQEPLFDFISSLSANGKKTAKVNYETNGWVAHQVSDIWAKTSPDRGEAVWALWPMGGAWLCAHLWEHYTYTMDKDFLKNKAYPLLEECASFLLDWLIEGRGGLLETNPSTSPEHMFTAPDRKPASVSYSSTMDISIIKEVFTIIISAAEVLGRHDDAIIKRVTVYQSKLPPTKRSRDGSIMEWAEDFEDPDVHHRHVSHLFGLFPGHTISLEQTPVLCKAVESSLIKRGDDGPGWSTTWKASLWAHLHNSEHAYRMIKHLIVLVDPDHESDYEGGLYSNLFTTHPPFQIDANFGFSGAIAEMLVQSTMKDLYLLPALPRDKWANGCVKGLKARGGVTVNICWKEGDLLEVGLWSEKLNSQVRLHYRGTVVLTSLSPGRVYSYNNLLKCVKTYSLPQKN 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00385 866 PANTHER ALPHA-L-FUCOSIDASE 2 48 860 - -
Vian3g00385 866 Pfam Glycosyl hydrolase family 65, N-terminal domain 64 307 IPR027414 -
Vian3g00385 866 SUPERFAMILY Six-hairpin glycosidases 317 825 IPR008928 GO:0005975
Vian3g00385 866 PIRSF UCP007663 31 864 IPR016518 GO:0004560
Vian3g00385 866 Gene3D - 292 771 IPR012341 GO:0005975
Vian3g00385 866 FunFam Alpha-L-fucosidase 2 292 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00385 Vian-Chr3 3670923 3677064 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00385 K15923 - gmx:100817294 1552.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00385 3 3670923 3677064 Vian3g00385 3 3670923 3677064 ECH