Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00363 ATGGGCAAGAAAAAGTCTGATTCAAAGTCCGACCACAGCTTCGAGAAGAAGCTTCAATTTTATTCCAAGGTGAAAGATGCTGTTGCCTCCTTGAGTGCCCAAAAGTCTATTTTGAAGAAAAAGAGCAAACAACAAAGACGGCAAAATAAATTGAAGGCATATAACCTATCTTCACTTTTAGAGTCCCTTCCTGAAGTGAGGGCATCAAAGAAACCAGGTCGTGAGAATGACTCCAAACTTAATTGTAAATCAAGACAGACGTTGGTGTTGAGGGAAAGAGATCGAGTTTCTGCAGTTCTTAAGGATCCTAGCTTTCAAGCAGATCCCCTGTCCGCCATTCAGCATTACTTACAGAAGACACAACCAGTTGTAGAGGAACAGCCTAAGAAAAAAGTGAACAAAAATGGATCCAAGAAGAAGAAGAAATCAAAGGCTTCAACTGGACTACAATCTATGGAAATTTAG 465 0.4022 MGKKKSDSKSDHSFEKKLQFYSKVKDAVASLSAQKSILKKKSKQQRRQNKLKAYNLSSLLESLPEVRASKKPGRENDSKLNCKSRQTLVLRERDRVSAVLKDPSFQADPLSAIQHYLQKTQPVVEEQPKKKVNKNGSKKKKKSKASTGLQSMEI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00363 154 MobiDBLite consensus disorder prediction 119 154 - -
Vian3g00363 154 Pfam Ribosome biogenesis protein SLX9 5 120 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
Vian3g00363 154 MobiDBLite consensus disorder prediction 67 85 - -
Vian3g00363 154 PANTHER PROTEIN FAM207A 3 137 - -
Vian3g00363 154 MobiDBLite consensus disorder prediction 36 85 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00363 - - gmx:100527125 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00363 3 3471627 3473301 Vian3g00363 3 3471627 3473301 ECH