Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00185 ATGGGGCAGCAAACTTCAAGCTTGTGCCTCATAGGCACAGGAAAACATGGAGACGGTGAAGTTCGATGTGTTCGAAGACAATTAATGATAGAAGCACTTGCTAACGAACTTCCCAGTGGGACAATCAGGTTCTCGTCAAAGGTTGTTGCAATTCAAGAATCTGGCCTCTTCAAGATACTGCATCTTGCTGATGGAACAACCATAAAAACCAAGGTATTGATTGGGTGTGATGGAATAAACTCTGTGGTGGCGAAGTGGCTGGGCTTCAAGGAGGCATCTTTTACCGGGAGATACGTGATCAGGGGTGACATAAAGCTGATGAACAACCATGGCCTTCAGCCAAATTTCATGCACTTCTTTGGAAAAGGCTTTCGATCGGGTGTTCTTCCTTGTGATGACACTACTGTGTATTGGTTTTTTACTTGGACTCCCACCACTGAAGAGAAGGAGCTAGTGAACAATCCAGGCAAAATGAAGCGATTGGTGTTGGAGAAGTGTGAGAAGATGCCAAGTCATATGAGATGCTTTATAGAGAAAACAGAAGCAGAAGATATCTTAACATCTCCATTGAGATATAGAAACCTGTGGGAGCTTGTGTCAGGAAATATCAGCAAAGGCAATGTTTGTGTTGTTGGAGATGCTTATCACCCGATGGCGCCTGATCTTGGTCAAGGTGGATGTTGTTCTTTGGAAGATGGGATTGTCTTAGGCAGGTACTTAGCTCAGGCATTCTGCAAAAAGGGTGAGACTGAGGAGCAATACAAGGAAATTGAAGCTTGCTTGAGGAAATATGCAAAAGAGAGAAGATGGAGAAACATTGATATCAGTGTTACGTCTTATGTTCTGGGGCTTCTTCTGCAAGGTGATTTGAAATTTCTGGCACATATGAGGGACAAAGTTTTGCCTCATTTCCTAGCTCAGTTGCTGGTGAAGAAGTCGGATTTTGATTGTGGAAAACTCAACACCTCTGATTAA 975 0.4338 MGQQTSSLCLIGTGKHGDGEVRCVRRQLMIEALANELPSGTIRFSSKVVAIQESGLFKILHLADGTTIKTKVLIGCDGINSVVAKWLGFKEASFTGRYVIRGDIKLMNNHGLQPNFMHFFGKGFRSGVLPCDDTTVYWFFTWTPTTEEKELVNNPGKMKRLVLEKCEKMPSHMRCFIEKTEAEDILTSPLRYRNLWELVSGNISKGNVCVVGDAYHPMAPDLGQGGCCSLEDGIVLGRYLAQAFCKKGETEEQYKEIEACLRKYAKERRWRNIDISVTSYVLGLLLQGDLKFLAHMRDKVLPHFLAQLLVKKSDFDCGKLNTSD 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00185 324 Gene3D - 3 299 IPR036188 -
Vian3g00185 324 SUPERFAMILY FAD/NAD(P)-binding domain 19 309 IPR036188 -
Vian3g00185 324 Pfam FAD binding domain 63 245 IPR002938 GO:0071949
Vian3g00185 324 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 220 236 - -
Vian3g00185 324 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 69 84 - -
Vian3g00185 324 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 205 220 - -
Vian3g00185 324 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 3 321 IPR044560 -
Vian3g00185 324 Coils Coil 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00185 Vian-Chr3 1572620 1574152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00185 20 321 Miscellaneous Gene Families AT5G05320 50.325 1.12e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00185 - - gmx:100808968 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00185 3 1572620 1574152 Vian3g00185 3 1572620 1574152 ECH