Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00180 ATGGGGTGTGTTGCTTCCAAACTAGAGGAAGAAGAGGAAGTTGTGTCTATTTGTAGAGAGAGAAAACGGCTGTTAAAGCTAGCTGTGGAGAAAAGATATGCACTTGCTGTGGCTCATTGTAAGTATTTTCACTCTCTCAATGCAGTAGCTGCGGCCATTAAGCTCTTTGTTGCACGCCACTCTTCACCTTCATCACCTTTCCTCATAACTTTCCCTCCTCCTTGCCCTTCTTCTCACTCTCCTTCTCCACCCTCCGAGAATGTCATCACTAACCCCATGTTCCTCCAGCAGACACCCTCAGAAACCAAACATGAAGCCATTGCTTGTGACTCATGCATCTCTTCAACATCCTCAGACTCTTCTGAGGAAGAGACTGAAGAGAAAAGGGAAGGAGAAAGTGAAAGCAAGGGAGAAGAACCGCAGCACGAACAACCATGTGGGTACTATTGCATGCCTGTGACTATGCCTATGTCCATGTCCATGTCCATGCCCGTGCCTATGCCCATGCCACCTTCAATGCCATCCCCTCAGAGAGATTTTGGATGGGACTTCTTCTACCCTTTTGACAGTTTGAGGAGTGATATGTGCGGCTACCACAGGCACTCAGATGATGATTTGAGGGCTGTGAGGGAGGAGGAAGGGATTCCTGAATTTTCCTCCATGTGTATTCCATTATTTCTGCATGGGTTCATATGCTTCTGTTTCAAGTTTCTCAAGCCTTGGGATTTTGAACCATCTGATCTCACTGCAGAAAGTTCGACTAAACTCATTCAGGCAATAACATGGAAGTCCATTTCATCTAGGCAGTCATCATGCAAGAGTCTCATGGCTCCAAATACGAAAAATTCCTCAACTTGGGTGGAATATAAGAATGATCTGTTTGATGATTATGGAGGAATGGATTCGGGAAGCCATTTATCAACCTTAGGAAGGTTATATGCATGGGAAAAGAAACTCTATGAGGAGGTTAAGGCTGGAGATAGCACAAGGAAAAATTATGAAAAAAAATGTGCGCAGTTGAGAAGTAAGAATGTTAGAGGAGATGATCTGCTGAGCACAGACAAAACCAAAGTTGAAGTGAAAGATCTGTATGCTGGGATCTTGGTTGCAATCCGACGGGCAGAATCAATCTCAAAGAGAATTGAGAAAATGAGAGATGAAGAACTACAACCTCAAATTGTTGAACTGTTAAAAGGCCTGACCCAGTCATGGAAGATCATGTTGGAGTCCCATGAAACCCAGAAGAAGATTCTGTCTGAAGTGAAGTACTTCACATGCACCACGTATGAGAAATTCTGTAACCAGTCTCATGGATTTGCAACTCTTCAACTCGAAGCTCAGCTTCGAAATTGGCGTGACTGCTTCAAAGAGTACACTGCAGCACAAGAAGCATATGTTGAAGCTTTACACGGATGGCTGAGTAAGTTCATAGTCCCTGAAGTGGAGTTTTACTCGAGAAGCAAAAACATTGCCTTGCCGTACGAAGTGAACGGGCCACCTCTGCTTGTGATATGCAACGATTGGTTAGCTTCAATGCAGAAGTTACCTGATAAAATGGTAACACTGGCATTGAAAAGTGTTGTGAAAGATGTTAGAGCTTTGTGGCTTCAGCAAAACAAAGAGCAACAGCAGAAAAGGAAGGTAGATAGGTTAACTAGAGTTTTGGACAGAAGATACGCTTCAGGAGGACTACCTAAAGTGGAGACAAAGATGCTTGAGCTGCATGCCACTGATGAGGAATCAAAGTGGAGTACTACTGATGAACAAGATGAGTGCATGATGGAGAAAAATGATCATGTGGAGACACTGAGAAGAAAACTTGAAGTGGAGAAGGAGAAGCACCACAGTAGCATGCAGGAAACACAGAGGATAACGTTACATGGATTGCAATCTGGGTTTTCTCTAGTGTTTGAATCCTTGTCGGAGTTCTCCAAAGCATCACAGAAAATGTACAATGATCTTGTAAGTTATAGTGAAAAAAGTGACAAGGTTGGGAACATTACATACATAGAGGGTGGCTGCAATATTGAAAGTTGCAACAGCAAAAAATAG 2052 0.4327 MGCVASKLEEEEEVVSICRERKRLLKLAVEKRYALAVAHCKYFHSLNAVAAAIKLFVARHSSPSSPFLITFPPPCPSSHSPSPPSENVITNPMFLQQTPSETKHEAIACDSCISSTSSDSSEEETEEKREGESESKGEEPQHEQPCGYYCMPVTMPMSMSMSMPVPMPMPPSMPSPQRDFGWDFFYPFDSLRSDMCGYHRHSDDDLRAVREEEGIPEFSSMCIPLFLHGFICFCFKFLKPWDFEPSDLTAESSTKLIQAITWKSISSRQSSCKSLMAPNTKNSSTWVEYKNDLFDDYGGMDSGSHLSTLGRLYAWEKKLYEEVKAGDSTRKNYEKKCAQLRSKNVRGDDLLSTDKTKVEVKDLYAGILVAIRRAESISKRIEKMRDEELQPQIVELLKGLTQSWKIMLESHETQKKILSEVKYFTCTTYEKFCNQSHGFATLQLEAQLRNWRDCFKEYTAAQEAYVEALHGWLSKFIVPEVEFYSRSKNIALPYEVNGPPLLVICNDWLASMQKLPDKMVTLALKSVVKDVRALWLQQNKEQQQKRKVDRLTRVLDRRYASGGLPKVETKMLELHATDEESKWSTTDEQDECMMEKNDHVETLRRKLEVEKEKHHSSMQETQRITLHGLQSGFSLVFESLSEFSKASQKMYNDLVSYSEKSDKVGNITYIEGGCNIESCNSKK 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00180 683 MobiDBLite consensus disorder prediction 121 141 - -
Vian3g00180 683 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
Vian3g00180 683 PANTHER UNCHARACTERIZED 251 658 - -
Vian3g00180 683 MobiDBLite consensus disorder prediction 112 145 - -
Vian3g00180 683 Coils Coil 593 613 - -
Vian3g00180 683 Pfam Protein of unknown function (DUF632) 250 532 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00180 Vian-Chr3 1485929 1489917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00180 244 547 Acyl Lipid Metabolism Gene Families AT2G27090 34.641 3.16e-46 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00180 - - gmx:100807897 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00180 3 1485929 1489917 Vian3g00180 3 1485929 1489917 ECH