Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00173 ATGGAGGGTTTAGCAGGTTTGAGCCATCTTTTTGTGACGATATTTCTAACTGGGTTTGGTGGTACCATAGCTATGCCTTCAATAACAGATGTTACCATGGCTGCACTTTGCCCTGGTCAAGATCAGTGCTCCCTTGCCATTTACCTCTCTGGTATCCAACAAGCTATGTCTGGAGTGGGGTCAGTGGTGATGACACCACTCATAGGAAACTTGTCCGACAGATATGGCAGGAAAACCTTGATCACTCTTCCTCTCACTCTATCAGTCATTCCTTATGTGATATTGGCATATAGCAGGGAGACCAAATTCTTCTATGCGTACTATGTTGTGAAAACTCTTGCTTCCATGGCAGGCGAAGGGTCCTTCCACTGCCTGGCTTTTGCATATGTGGCAGACAAGGTTCCAGATGGGAAACGAACATCCGCATTTGGGATACTTGCTGGTGTTGGATCAGCATCATTCGTTGGTGGAACATTAGCAGCTCGTTTCCTATCCACTGCCTTGACATTTCAGGTTGCTGCTGTCTTGTCAATGATTGCATTGGTGTACATGAGAATTTTCCTTAAGGATAGTGTACCTGGTGGTGGTGTGAGCCAGCCATTGTTGAAAGAGGTGGAGGAGACATGTGCTGAGGATGATTCATCACGAAAAAGGGCAACAGGAGCATTTAAGAAACTGCCCTCTCTGGGGGATTTGATTTGCTTGCTCAAGTGTAGTCCCACGTTCTCGCAAGCAGCAGTTGTTTCGTTCTTCAATAGTCTTGTGGACGGTGGCTTGATGGCTGTGTTGCTGTATTATTTAAAGGCACGCTTTCAATTCAACAAGAACCAGTTTGCAGATTTGTTGTTGATTACTGGGGTTGGAGCTACTCTTGCACAACTATTTCTCATGCCCATTTTAGTGCCTGTTATAGGAGAGGAGAAACTACTCTCCACAGGGCTCTTGATTGGCTGCATAAATGTCCTTGTCTACAGCATAGCATGGTCAGCATGGGTTCCTTATGCTCTAGCAGGTTGCTCTATATTCTCAGTTTTTGTGCGGCCAAGTTTATGCAGCATTGCATCGAAGCAAGTTGGACCTACAGAACAGGGAATGGTTCAAGGATGTCTTTCAGGAATTAGTTCCTCCGCCAACATCATTGCTCCGTTAGTTTTCAGTCCACTGACAGCCTTATTCCTGTCAGAAAATGCTCCGTTTTATTATCCTGGCTTCAGTCTAATGTGCCTTGGGCTAGCGATGATGATAGCATTTTTTCAGAGTCTAATGATCCGAGCTGCTCCTCCTATTGCGGTTGGAAAAATTAGCAATAGCCGCTGCACGGATACTTTGGTCTGA 1335 0.4554 MEGLAGLSHLFVTIFLTGFGGTIAMPSITDVTMAALCPGQDQCSLAIYLSGIQQAMSGVGSVVMTPLIGNLSDRYGRKTLITLPLTLSVIPYVILAYSRETKFFYAYYVVKTLASMAGEGSFHCLAFAYVADKVPDGKRTSAFGILAGVGSASFVGGTLAARFLSTALTFQVAAVLSMIALVYMRIFLKDSVPGGGVSQPLLKEVEETCAEDDSSRKRATGAFKKLPSLGDLICLLKCSPTFSQAAVVSFFNSLVDGGLMAVLLYYLKARFQFNKNQFADLLLITGVGATLAQLFLMPILVPVIGEEKLLSTGLLIGCINVLVYSIAWSAWVPYALAGCSIFSVFVRPSLCSIASKQVGPTEQGMVQGCLSGISSSANIIAPLVFSPLTALFLSENAPFYYPGFSLMCLGLAMMIAFFQSLMIRAAPPIAVGKISNSRCTDTLV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00173 444 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 428 IPR020846 GO:0022857
Vian3g00173 444 Pfam Major Facilitator Superfamily 10 382 IPR011701 GO:0022857|GO:0055085
Vian3g00173 444 SUPERFAMILY MFS general substrate transporter 10 417 IPR036259 -
Vian3g00173 444 CDD MFS_SLC46_TetA_like 10 422 - -
Vian3g00173 444 Gene3D MFS general substrate transporter like domains 6 420 IPR036259 -
Vian3g00173 444 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 7 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00173 Vian-Chr3 1410026 1415223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00173 2 437 Organic Solute Cotransporters AT2G16990 47.098 3.40e-128 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00173 - - gmx:100803054 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00173 3 1410026 1415223 Vian3g00173 3 1410026 1415223 ECH