Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00163 ATGGAAACGAAGGAAGAAACTGCCGTCGCCGGGGAGGCGAGCCTAGATGGGCTGCCGTCGGCTCTGGTGGCAACCGTCATGACGAAGCTGGACATCGCCTCCATCTGCTCCCTCGCCTCCACCTCCTCCGCCTTCCGCTCCTGCGCCCGTCACATCCTCTCTTTCCTCCCCTCCTTCAACCTCCTCGACACTGCTCCCTCCGGCGACATGCTCAGACCCTTGCTGCCGCCCAATCCCTACCTCACCACTCTCAAGCTCGATTGTTCCCGCCTCGATGACTCCGCCATCGCCTTCCTCCTCAAACCCTCCCTCCAAGACCTATCTCTCCACAATTGCGCCGATTTCAGTGGCAGACTCTTGTCTGAGATCGGCAACCGCTGCAAGGATCTAAGGTCTCTTTACCTTGGCTCCGTCGCCGAGAAAAGAGGGAGGGCCATTCATATTTCCGATCTGGAGGAGTTGCTCAGCGGTTGCTCCCACTTGGAAGCACTGATTCTGATGTTTGATGTCTCTCTCTTTCTACGGCACAACTTTGCTCGAGTTTGGGCTTCTGCATCAGAGAAACTCACTTCTCTTGAGATTGGCTACATTTCTTCAGTTACCGTCACTGAACTGCTCAGCCCAAATTTGGGATCCCATCTGCCCTCAAATCCTGTTCAACCGGCTATACTTCCAAGCATTCAGAAACTGTGTCTTAATGTAGACTATATAACTGATGCTATGATCGGCACAATATCCAAAGGTCTAATGTTTTTGACGCATTTGGATCTTCAAGATGCACCATTGATTGAACCAAGAGTTACGTTTGACCTGACCAACGCTGGTCTTCAACAAATTAATCAACTTGGGAGATTGAAACATCTTTCACTGGTTCGAAGCCAGGAGTTTCTCATTACCTACTTTCGAAGAGTGAATGATCTGGGATTGCTTCTAATGGCAGACAAGTGTGCAAACATGGAAAGCATATGCCTTGGTGGCTTTTGTCGCGTCACAGACACTGGTTTCAAAACCATCCTGCATTCTTGCACTCGCTTGTACAAGCTTAAGGTCACTCATGGGACTCATTTAACTGATTTAGTTTTTCATGATATTTCCGCAACATCCCTTACTTTGACACATGTTAGCTTAAGACGGTGCAATCTGTTAACTAACCATGCTGTTTTGAGTTTGGCATCAAACAAGGAACTCAAAATTCTTGACCTGAGGGATTGCAGAAGCCTTGGGGACGAAGCTCTCCTGGCCATTGGCACTCTGCCTAGACTGAAAATTTTACTATTAGATGGCTCTGATATAACTGATGCAGGACTTTTGTACTTAAGAGCATCTGTTATTAGTTCACTGTATGCATTGTCTCTTCGTGGCTGCAAGAGACTAACAGATAAATGTATCACAGCTCTATTTAATGGCTGCTGCGTGCTGGAATTGCGAGAACTGGATCTATCTAACCTTCCTAACCTCTCGGATAATGGAGTTCTGCTGCTTGCAAAAAGTAGGATTCCCTTCTTTGAGCTCCGTATGCGACAATGCCCTCTGGTTGGTGATACTGCAGTCATGGCATTAGCTTCGATGCTAATTGACGAGGCCAAACATGGAAGCAGTTTGCGATTGCTGGATTTTTATAACTGTGGTGGCATTACAGCGCTTGCATTTCGCTGGTTGAAGAAACCATATTTTCCAAGGCTCAAATGGTTGGGAGTGACAGGGAATGTTAACAGAGACATGGTAGATGCCTTAGCCAGAAGCAGACCTTTCTTACATGTGGCATGCCATGGTGAGGAGCTTGGGGCTGATCCCTACGATACTTCAGATGGGTTATACACACATGATTATGATGACGTGGATGAGTTTGAGCAATGGCTTCTTGAAGCAGATATTGACAGTGACTTTGAAGAGATGGGCGATGCTGAAAATAATGATGAAATGGTTGCGTGA 1932 0.4726 METKEETAVAGEASLDGLPSALVATVMTKLDIASICSLASTSSAFRSCARHILSFLPSFNLLDTAPSGDMLRPLLPPNPYLTTLKLDCSRLDDSAIAFLLKPSLQDLSLHNCADFSGRLLSEIGNRCKDLRSLYLGSVAEKRGRAIHISDLEELLSGCSHLEALILMFDVSLFLRHNFARVWASASEKLTSLEIGYISSVTVTELLSPNLGSHLPSNPVQPAILPSIQKLCLNVDYITDAMIGTISKGLMFLTHLDLQDAPLIEPRVTFDLTNAGLQQINQLGRLKHLSLVRSQEFLITYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGFKTILHSCTRLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASNKELKILDLRDCRSLGDEALLAIGTLPRLKILLLDGSDITDAGLLYLRASVISSLYALSLRGCKRLTDKCITALFNGCCVLELRELDLSNLPNLSDNGVLLLAKSRIPFFELRMRQCPLVGDTAVMALASMLIDEAKHGSSLRLLDFYNCGGITALAFRWLKKPYFPRLKWLGVTGNVNRDMVDALARSRPFLHVACHGEELGADPYDTSDGLYTHDYDDVDEFEQWLLEADIDSDFEEMGDAENNDEMVA 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00163 643 PANTHER UNCHARACTERIZED 363 552 - -
Vian3g00163 643 Pfam Leucine Rich repeat 393 415 IPR001611 GO:0005515
Vian3g00163 643 Pfam F-box domain 16 52 IPR001810 GO:0005515
Vian3g00163 643 SMART LRR_CC_2 101 126 IPR006553 -
Vian3g00163 643 SMART LRR_CC_2 368 393 IPR006553 -
Vian3g00163 643 SMART LRR_CC_2 531 556 IPR006553 -
Vian3g00163 643 SMART LRR_CC_2 394 418 IPR006553 -
Vian3g00163 643 SMART LRR_CC_2 503 523 IPR006553 -
Vian3g00163 643 SMART LRR_CC_2 316 341 IPR006553 -
Vian3g00163 643 SMART LRR_CC_2 444 469 IPR006553 -
Vian3g00163 643 SMART LRR_CC_2 472 497 IPR006553 -
Vian3g00163 643 Gene3D Ribonuclease Inhibitor 426 598 IPR032675 -
Vian3g00163 643 Gene3D Ribonuclease Inhibitor 297 425 IPR032675 -
Vian3g00163 643 FunFam F-box/LRR-repeat protein 10 isoform A 52 468 - -
Vian3g00163 643 SUPERFAMILY RNI-like 51 292 - -
Vian3g00163 643 SUPERFAMILY F-box domain 8 50 IPR036047 GO:0005515
Vian3g00163 643 Gene3D Ribonuclease Inhibitor 18 220 IPR032675 -
Vian3g00163 643 SUPERFAMILY RNI-like 304 571 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00163 - - pvu:PHAVU_007G016400g 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00163 3 1306581 1308976 Vian3g00163 3 1306581 1308976 ECH