Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00009 ATGGACGAGGAGCAGCGAGTGTTTAGGGACGGGGGAATCGTGATCGAAGGAGATAGAATCAAAGCTATTGGACAATCTGCACAAATTCTTGCTGAATTTTCTGATGTGGCCCACCACATCCTCGATCTCACCGGCCACATCTTACTCCCTGGATTTATTAACACCCACGTCCATAGTTCCCAACAACTCGCTAGAGGCATAGCCGATGATGTGGACTTGATGACCTGGTTGCATCACCGCATCTGGCCCTACGAATCCAACATGACCCAACACGATTCTTACCTCTCTACTTTGCTTTGCGGGATCGAGCTCATTCACTCCGGCGTAACCTGTTTTGCTGAAGCTGGGGGTCAACATGTGTCTGAAATGGCTAGAGCAGTCAGTTTACTGGGTCTGCGAGCTTGTTTAACCCAGTCCACCATGGACTCTGGCCACGGTTTGCCTCCATCCTGGGCCACTCGTACCACGGATCAATGCATTCAGTCTCAAAAGGACAATTATGACAAGTACCACAACACAGCCCATGGTCGCATCAGAATCTGGTTCGGAATACGACAAATCATGAACTCTACTCCTCGCTTGCTTATCGAAACAAGAGATGCTGCAACACAACTAAAAACTGGAATACACATGCATGTTGCAGAGATACCGTATGAGAACCAACTAGTCAGGGATGTTCACAAAGTAGATCACGGAACTGTTACATACTTGGACAAGATAGATTTCCTTCAAAGCAATCTGCTAGCAGCTCACTCAGTTTGGCTTGATAATAACGAGATATCTCTTCTTTCAAGATCAGGGGTCAAAGTGTCCCACTGTCCTGCTGCTGCAATGCGAATGCTTGGATTTGCACCTGTAAGGGAGATGCTTGATGCTGGCGTTTGTGTCTCTCTGGGAACTGATGGGGCCCCATCAAACAATCGCATGAGCATCGTTGATGAAATGTACCTAGCTTCTCTAATTAATAAAGGACGGGAAGTTTATGCTAATGGAACCACAGATCCAACAGCATTGCCCGCTGAAACTATTCTTAGAATGGTTACAGTTAATGGTGCAAAGTCGGTATTGTGGGATGACGAACTAGGTTCTCTTGAGGTTGGGAAAAAGGCGGACATTGTTGTAGTCAATCCTTCCTCTTGGCCTATGGTTCCTGTTCATGACTGCATTTCCAGCATAGTGTATTCCATGCGATCAGAAAATGTGATATCTGTCATGTGCAATGGCGTGTGGATAATGAAGAACAAGAAGATTATACACGTGGACGAGGAAGAAGTTATTTTGAAGGCAAAAGAGGCTTCTGTTGAACTTCTGAAGAGGGCAGGCATAACATTACCAAGCAGAATGAACATGATTTGA 1356 0.4587 MDEEQRVFRDGGIVIEGDRIKAIGQSAQILAEFSDVAHHILDLTGHILLPGFINTHVHSSQQLARGIADDVDLMTWLHHRIWPYESNMTQHDSYLSTLLCGIELIHSGVTCFAEAGGQHVSEMARAVSLLGLRACLTQSTMDSGHGLPPSWATRTTDQCIQSQKDNYDKYHNTAHGRIRIWFGIRQIMNSTPRLLIETRDAATQLKTGIHMHVAEIPYENQLVRDVHKVDHGTVTYLDKIDFLQSNLLAAHSVWLDNNEISLLSRSGVKVSHCPAAAMRMLGFAPVREMLDAGVCVSLGTDGAPSNNRMSIVDEMYLASLINKGREVYANGTTDPTALPAETILRMVTVNGAKSVLWDDELGSLEVGKKADIVVVNPSSWPMVPVHDCISSIVYSMRSENVISVMCNGVWIMKNKKIIHVDEEEVILKAKEASVELLKRAGITLPSRMNMI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00009 451 FunFam Amidohydrolase family protein, expressed 51 355 - -
Vian3g00009 451 SUPERFAMILY Composite domain of metallo-dependent hydrolases 6 68 IPR011059 GO:0016810
Vian3g00009 451 Gene3D Urease, subunit C, domain 1 1 428 IPR011059 GO:0016810
Vian3g00009 451 Gene3D - 51 355 - -
Vian3g00009 451 SUPERFAMILY Composite domain of metallo-dependent hydrolases 335 442 IPR011059 GO:0016810
Vian3g00009 451 FunFam Uncharacterized protein 363 393 - -
Vian3g00009 451 Pfam Amidohydrolase family 47 410 IPR006680 GO:0016787
Vian3g00009 451 CDD ATZ_TRZ_like 1 417 - -
Vian3g00009 451 SUPERFAMILY Metallo-dependent hydrolases 50 363 IPR032466 -
Vian3g00009 451 PANTHER AMINOHYDROLASE SSNA-RELATED 1 450 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00009 - - gmx:100500128 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00009 3 56701 62286 Vian3g00009 3 56701 62286 ECH