Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00006 ATGGAAGAGAAATACAAATACCCAAGTCTGGAAATATCGGAGAAGACCCCAAAATCCGGTGTTTGGTATGTTATATTGAATCGTCCATCACGACGGAACGCTCTCTCCCATGATTTCTTCATCCACTTCCCCAAGGCCCTCTGTGCCCTCGATCACGACCCCGACGTTAAGGTCATCGTCTTATCGGCCGCTGGCAACCACTTCTGCTCCGGCATCGACCTCTCCATTTTGGGATCAACCGCATCCAATTCGGGTTCCGGCGAGGCCCTCCGCCGACAGATCATGGCGATGCAAGATGCCGTCACTGCCCTTGAACGGTGCCGGAAGCCTGTGATTGCGAGTATCCACGGAGCGTGCATCGGTGGTGGAATTGACATCGTCACTGCGTGTGACATCAGGATGTGCACGAAGGAGGCGTTTTTTTCCGTTAAAGAAGTGGATTTGGCCCTGGCGGCTGATCTGGGAACTCTTCAGAGGCTACCCCTTATTGTGGGGTTCGGCAACGCCATGGAACTGGCTTTGACCGGTCGCACCTTCACCGGTGAGGAGGCTAAGGAATTAGGTCTCGTTTCTCGCGTTTTCGACTCCAAACATCACCTCGATCAGGCCGTCATGGATCTCGCTCAAGCAATTGCCATCAAGTCTCCCCTTGCTGTTGTTGGGACAAAAATGGTGCTGCTTAAAAGTAGGGACTTAACCGTGGATCAGGGGTTGGATTATGTGGCAACCTTGAATTCTGCCAGATTGTTATCCTCTGACTTAACTGAAGCAGTGACGGCACAGAAACAGAAACGCAAGCCAGTATTTTCCAAGCTCTGA 819 0.5201 MEEKYKYPSLEISEKTPKSGVWYVILNRPSRRNALSHDFFIHFPKALCALDHDPDVKVIVLSAAGNHFCSGIDLSILGSTASNSGSGEALRRQIMAMQDAVTALERCRKPVIASIHGACIGGGIDIVTACDIRMCTKEAFFSVKEVDLALAADLGTLQRLPLIVGFGNAMELALTGRTFTGEEAKELGLVSRVFDSKHHLDQAVMDLAQAIAIKSPLAVVGTKMVLLKSRDLTVDQGLDYVATLNSARLLSSDLTEAVTAQKQKRKPVFSKL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00006 272 CDD crotonase-like 20 211 - -
Vian3g00006 272 Pfam Enoyl-CoA hydratase/isomerase 18 270 IPR001753 -
Vian3g00006 272 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 112 132 IPR018376 GO:0003824
Vian3g00006 272 FunFam Delta3,5-delta2,4-dienoyl-CoA isomerase 2 212 - -
Vian3g00006 272 Gene3D - 14 213 - -
Vian3g00006 272 PANTHER ENOYL-COA HYDRATASE 2 272 IPR045002 GO:0016853
Vian3g00006 272 Gene3D - 214 272 IPR014748 -
Vian3g00006 272 SUPERFAMILY ClpP/crotonase 16 270 IPR029045 -
Vian3g00006 272 FunFam Delta3,5-delta2,4-dienoyl-CoA isomerase 213 272 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00006 7 209 Acyl Lipid Metabolism Gene Families AT5G43280 63.810 8.68e-93 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00006 K12663 - gmx:100804855 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00006 3 46218 47242 Vian3g00006 3 46218 47242 ECH