Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00005 ATGAAGAGGTCTCTGAGAAAGTTGGGAGTTCTGACGTTAGAGAAGCATCACCACCACCGTGACCGCTCTAACATTCTGCCTTTGTCCCAGTTAGAGGACCTCGCTCAGGCTACCCAGGACATGGAAGACATGAGAGACTGCTACGATAGCTTGCTTTCCGCGGCTGCCGCGGCTGCCAATAGTGCTTATGAATTCTCAGAATCCTTGGGAGAATTGGGCTCTTGCCTTCTTCAGAACACCGCCTTGCATGACGATGAAGAAAGCGGCAAAGTTCTCATAATGCTCGGTAAAATGCAGTTTCAACTCCAGAAGCTCATTGATAAATATCGCTCTCATATTACCCAGACAATTACCGTTCCCTCGGATTCTCTTCTGAATGAACTTCGAATTGTTGAGGAGATGAAGCGACATTGTGACGAAAAAAGAGTTGCATACGAGTCCATGTTAACAAGATATAGAGAAAGAGGTAGGTCTAGAAGCGGAAGAGCAGAGACTATTTCCTTGCAGCAGTTACAAATTGCTCGTGATGAATATGATGAGGAGGCCACCTTATTTGTTTTCCGCTTGAAATCTCTGAAGCAAGGTCAATCGTGGAGCCTTCTAACACAGGCAGCACGTCACCATGCAGCTCAGTTGTGTTTCTTCAAGACAGCAGTTAAATCTCTTGAGACAGCAGAGCCGCACGTAAAATTAGTAACAGAACAACATCACATTGATTACCACTTCATTGGTATTGAAGGGGAGGATGAGGATGATGACGAAGATGAAGATGAAAATGAAGATGGTGACAGCCATGATGAGAATGATGATGGGGAGCTGAGTTTTGACTATACACAAAATGAACACGAGCAAGATGTTTCTACATTAGACAACTCAAAGAAGGAAAACTTGGATAAGCTTCGCAGGAATTCATTCTCCTTTAGGGTTAGGTCAGCGAGCCAATCTGCCCCACTTTTAGCTGATAATAAATGTGATTCTAGAGAAAGGCTGAGTAAGATGCGGCCCACTTTATCACGGAAGTTCAATTCATATGTGCTGCCTACACCAGTTGATGCAAAGAGTTCCGTATCTCCGACGTCAAGTAAGCAAGTACCTTCCAAAATAAAGGCAAATTTAGATGAGCCTATGAAGAATTTGTATCATTCATCCCCACTGGAACAGAAAAAATATGGAAAAACTTTTGGAGATGGGGCATTTTCTGGTCCGAATGTTAGGACTGTGCAGTCTGTAGTCAAGGAGAGTAATACCAATACTGCTACCACTAGATTGCCACCTCCTTCAATTGATGGTAATTTATCCTCAAATCATGACTTTGTTACTGCTTACTCTAAAAAGATTAAAAGACAAGCCTTTTCTGGTCCATTGGTAAGTAATGCTTGGCCAACCAAGCCTGTTTCTATAGAGAGTGTCCAGTTGTTTTCTGGACCTCTTTTACGGACATCAATTCCTCAGTTTCCATCATCATCATCTCCAAAAGTATCTCCTAGTGCTTCTCCCCCTCTTTCATCTTCACCAAAAATAAATGAGCTTCATGAACTTCCTAGGCCTCCAACCATTTCCGCATCCAATTCTAAGCTTTTAGGTTTGGTGGGTCATTCAGGTCCATTGGTGTCCCGAGGTCCCCAGCTTTCTGCTCGAAATAATTTGGTTACATCAAATGCAGCATCTCCATTGCCAATGCCTCCTTCAGCAATGGCTCGAAGTTTCTCCATACCTTCTAGCAGTGCTAAAGTTACAGCATTAGATGGGTCAAGACCTCCAGAAGACCCTAACAGATCATCAATATCCGAGTATGTTGATTCTCCTCCTCCGTTGTACATTGCTTCATCTACTAGTTAG 1839 0.4328 MKRSLRKLGVLTLEKHHHHRDRSNILPLSQLEDLAQATQDMEDMRDCYDSLLSAAAAAANSAYEFSESLGELGSCLLQNTALHDDEESGKVLIMLGKMQFQLQKLIDKYRSHITQTITVPSDSLLNELRIVEEMKRHCDEKRVAYESMLTRYRERGRSRSGRAETISLQQLQIARDEYDEEATLFVFRLKSLKQGQSWSLLTQAARHHAAQLCFFKTAVKSLETAEPHVKLVTEQHHIDYHFIGIEGEDEDDDEDEDENEDGDSHDENDDGELSFDYTQNEHEQDVSTLDNSKKENLDKLRRNSFSFRVRSASQSAPLLADNKCDSRERLSKMRPTLSRKFNSYVLPTPVDAKSSVSPTSSKQVPSKIKANLDEPMKNLYHSSPLEQKKYGKTFGDGAFSGPNVRTVQSVVKESNTNTATTRLPPPSIDGNLSSNHDFVTAYSKKIKRQAFSGPLVSNAWPTKPVSIESVQLFSGPLLRTSIPQFPSSSSPKVSPSASPPLSSSPKINELHELPRPPTISASNSKLLGLVGHSGPLVSRGPQLSARNNLVTSNAASPLPMPPSAMARSFSIPSSSAKVTALDGSRPPEDPNRSSISEYVDSPPPLYIASSTS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00005 612 MobiDBLite consensus disorder prediction 484 519 - -
Vian3g00005 612 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 607 IPR037488 -
Vian3g00005 612 MobiDBLite consensus disorder prediction 413 432 - -
Vian3g00005 612 MobiDBLite consensus disorder prediction 484 505 - -
Vian3g00005 612 Gene3D Arfaptin homology (AH) domain/BAR domain 29 243 IPR027267 -
Vian3g00005 612 MobiDBLite consensus disorder prediction 576 612 - -
Vian3g00005 612 Pfam BAR domain 65 227 IPR004148 GO:0005515|GO:0005737
Vian3g00005 612 SUPERFAMILY BAR/IMD domain-like 32 230 IPR027267 -
Vian3g00005 612 MobiDBLite consensus disorder prediction 316 335 - -
Vian3g00005 612 MobiDBLite consensus disorder prediction 246 270 - -
Vian3g00005 612 CDD BAR 63 228 - -
Vian3g00005 612 MobiDBLite consensus disorder prediction 246 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00005 Vian-Chr3 36946 40581 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00005 - - gmx:100784870 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00005 3 36946 40581 Vian3g00005 3 36946 40581 ECH