Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03257 ATGGGTGGCAAGAGAAAATTGTGGTTGTCGATGTTATGCCTGTTGGCGGCGGCAGTGCAAGGTGAAGACCCGTACTTGTATTACACATGGAACGTGACCTACGGGACGATATCTCCTCTTGGAGTGCCCCAGCAGGGTATTCTCATCAACGGCCAATTCCCAGGACCCGAAATCAACAGCACAAGCAACAACAACATTGTGGTAAATGTTTTTAACAACCTTGACGAGCCATTCCTCTTCACCTGGCATGGTATTCAACACAGGAAGAACTCATGGCAAGACGGTACACCAGGAACCTCATGCCCCATCGCTCCAGGGACAAACTACACCTACCACTTCCAAGTGAAGGATCAAATTGGAACTTTCTTCTACTATCCTTCTTTAGGAGTGCACAGGGCAGCCGGTGGTTTCGGTGGCCTTCGAGTCTTCAGTCGTCTTTTGATTCCCGTTCCATATGCTGATCCAGAGGATGAGTATTGGGTTCTCATGGGTGACTGGTACACAAAGAGCCACAACATCCTCAGGAAATTCTTGGACACCGGTCGCTCTCTTGGTAGCCCACAGGGTGTCCTCATCAATGGCAAAACAGCCAAGGGTGATGGCAGTGATGAACCCCTTTACACCATGATTCCTGGCAAGACCTACAAGTACAGAATATGCAACGTTGGTCTCAAGGACGCCCTTAATTTCAGGATCCAAGGCCATTCCATCAAGCTTGTCGAGACCGAAGGCTCCCACGTTGTCCAAAACGTCTATGACTCTCTTGACGTTCATGTTGGTCAATGCTTTACTGTCCTTGTCACCGCCGACAAAGACCCTAAGGACTATTACATGGTCGCCTCCACTCGCTTCACCAAATACGATCTCACTGCCAAGGCCCTCATCCGCTACACCAATAGTGCTGGCCCTGCCTCGCCGGAGCTCCCTCCATCGCCAGTTGGTTGGGCCTGGTCTCTTAACCAGTTCCGCTCCTTCCGTTGGAACCTCACCGCCAGTGCTGCAAGGCCCAATCCCCAGGGTTCTTACCATTATGGTCAGATCAACATCACTCGCACCATCAAGCTCGCCAACTCCGTAAGCAGAGTCCAAGGTCTTCGTTATGCCATCAATGCCGTCTCACATGTAGATCCTGAAACTCCTCTAAAGCTCGCTGAGTACTACGGAGTTGCTGACAAGGTTTTCAACTACAACACCATATCCGACGAGCCCCCATTTGATCTGAACTCAATCACCAAGGTGCCTAATGTCATCAATGCTACATTCCGCGACTTCATCGAGATCATCTTTGAGAACCATGGAAAAACCGTCCAATCATACAATTTGGATGGTTACTCGTTCTTTGCAGTCGCCATTGAGCCAGGCAGATGGAGCCCTGAGAAAAGGAAGAACTATAACCTTCTGGACGCCGTGAGCAGACACACCATTCAAGTCTTCCCCAAATCTTGGGCCGCCATCATGTTGACTTTCGACAATGCTGGAATGTGGAACCTGAGATCGGAGCATGCTGAGAATCGTTACCTGGGGCAACAACTCTACGTGAGCGTTTTGTCTCCTGGACGTTCCCTCAGGGACGAGTACAACCTCCCAGATACCCAGCTTCTTTGCGGCATCGTCAAGGATATGCCCAAGCCACCACCATACTCTTCTTAG 1650 0.5036 MGGKRKLWLSMLCLLAAAVQGEDPYLYYTWNVTYGTISPLGVPQQGILINGQFPGPEINSTSNNNIVVNVFNNLDEPFLFTWHGIQHRKNSWQDGTPGTSCPIAPGTNYTYHFQVKDQIGTFFYYPSLGVHRAAGGFGGLRVFSRLLIPVPYADPEDEYWVLMGDWYTKSHNILRKFLDTGRSLGSPQGVLINGKTAKGDGSDEPLYTMIPGKTYKYRICNVGLKDALNFRIQGHSIKLVETEGSHVVQNVYDSLDVHVGQCFTVLVTADKDPKDYYMVASTRFTKYDLTAKALIRYTNSAGPASPELPPSPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLANSVSRVQGLRYAINAVSHVDPETPLKLAEYYGVADKVFNYNTISDEPPFDLNSITKVPNVINATFRDFIEIIFENHGKTVQSYNLDGYSFFAVAIEPGRWSPEKRKNYNLLDAVSRHTIQVFPKSWAAIMLTFDNAGMWNLRSEHAENRYLGQQLYVSVLSPGRSLRDEYNLPDTQLLCGIVKDMPKPPPYSS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03257 549 SUPERFAMILY Cupredoxins 154 336 IPR008972 -
Vian2g03257 549 CDD CuRO_2_AAO_like_1 157 297 IPR034271 -
Vian2g03257 549 Gene3D - 15 143 IPR008972 -
Vian2g03257 549 Pfam Multicopper oxidase 389 516 IPR011706 GO:0005507|GO:0016491
Vian2g03257 549 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Vian2g03257 549 SUPERFAMILY Cupredoxins 22 171 IPR008972 -
Vian2g03257 549 SUPERFAMILY Cupredoxins 347 535 IPR008972 -
Vian2g03257 549 Pfam Multicopper oxidase 158 299 IPR001117 -
Vian2g03257 549 Gene3D - 155 335 IPR008972 -
Vian2g03257 549 Gene3D - 345 541 IPR008972 -
Vian2g03257 549 PANTHER MULTI-COPPER OXIDASE 44 514 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03257 Vian-Chr2 52803900 52805549 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03257 K00423 - gmx:100812197 920.998