Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03256 ATGGTGCGGGGTGAAGACCCCTATATCAACCATACATGGAACGTTACCTATGGCATCATCTCCCCATTGGGAGTACCCCAGCAAGGCATTCTCATCAATGGCAAATTCCCAGGACCCAGTATTAATACCACCAGCAACAACAATCTAATAGTCAATGTCTTCAATAATCTTGACGAGCCTCTTCTTTTTACATGGAATGGCATCCAGCACAGAAAGAATTCGTGGCAAGATGGGGTCCTCGGTACAAACTGCCCCATTCCTCCAGGGAAAAATTTCACCTACCGTATGCAGGTGAAGGACCAGATAGGTAGTTTCTTCTACTACCCGAGCACAGCGTTGCACAGGGCAGCTGGTGGTTTTGGGTCGCACCGTATAAACAGCAGGTTGCTGATTCCAGTGCCGTACCATGATCCCGAGGACGAATACGACGTTGTGATCGGTGACTGGTACACAAAGAGCCACACCACTCTGAGGAAGTTCTTGGATAGCGGTCGCTCCATTGGGAGGCCTGAAGGTGTTCTAATCAACGGCAAAACGGCTAAAGGTGATGGAAGTGACCAGCCATTGTTCACCATGAAGCCCGAAAAGACCTACAAATTCCGAGTATGCAACGTAGGGATGAAATTTTCACTCAACTTCAGGATCCAAGGTCACCCGTTGACGGTTGTTGAGATTGAAGGCTCCCACGTGGTACAAAACCAATACGAGTCTCTGGACGTCCATATAGGTGGCTGCTTTTCTGTCCTTGTCACAGCAGACAAGGACCCAAAGGATTACTACATGGTGGCTTCCACGCGTTTCAGCAAGACTGTTCTCACAGGAAAAGGCATCATCCGTTACACAAATGGCAAGAGTGGTCCCTCGCCCGACATCCCGGAGGCTCCAGTCGGCTGGGCTTGGTCTCTCAATCAATTCCGTTCCTTCCGCTGGAATCTCACTGCCAGCGCCGCCAGGCCCAACCCTCAGGGTTCCTACAAATACGCCAAAATCGAAATCACCCGTACCATCAAGCTCATCAACTCCGTCAGTAGGGAAAACGGTAAGCTTCGCTATGCCCTCAATGGTGTATCCCACGAAGACCCCGAAACTCCTCTCAAACTAGCTGAATACTATGGAGTTGCTGACAAGGTTTTCAAATATAATACTATCAAAGACGACCCATCATCTGACGTTGGAACCACTGTTAAAATTCAGCCAAATGTTCTCAGCCTTGACCACCGTAAATTCATCGAGGTCATCTTTGAGAACCATGAAAAATCTATCCAGTCATATCACATAGATGGTTATGCGTTCTTCGCAGTCGCCATAGAGCCTGGCAAATGGACCCCAGAGAAGAGGAACAGCTACAACCCTCTCGATGCCATCAGCAGACACACAATTCAGGTCTTCCCAAAATCTTGGGCCGCCATCTTGTTATCAACCGACAACGTTGGAATGTGGAACTTGAGATCGATGATTACTGAAAATATGTATCTTGGCCAACAGATGTACTTCAGCATTATCAGCCCCGAGCGTTCTCTCAGAGACGAGTACAATATTCCAGACAACGCTTTACTTTGCGGTGTTGTCAAGGGTTTGCCAAAGCCCCCACCATACACCTAA 1602 0.4844 MVRGEDPYINHTWNVTYGIISPLGVPQQGILINGKFPGPSINTTSNNNLIVNVFNNLDEPLLFTWNGIQHRKNSWQDGVLGTNCPIPPGKNFTYRMQVKDQIGSFFYYPSTALHRAAGGFGSHRINSRLLIPVPYHDPEDEYDVVIGDWYTKSHTTLRKFLDSGRSIGRPEGVLINGKTAKGDGSDQPLFTMKPEKTYKFRVCNVGMKFSLNFRIQGHPLTVVEIEGSHVVQNQYESLDVHIGGCFSVLVTADKDPKDYYMVASTRFSKTVLTGKGIIRYTNGKSGPSPDIPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYKYAKIEITRTIKLINSVSRENGKLRYALNGVSHEDPETPLKLAEYYGVADKVFKYNTIKDDPSSDVGTTVKIQPNVLSLDHRKFIEVIFENHEKSIQSYHIDGYAFFAVAIEPGKWTPEKRNSYNPLDAISRHTIQVFPKSWAAILLSTDNVGMWNLRSMITENMYLGQQMYFSIISPERSLRDEYNIPDNALLCGVVKGLPKPPPYT 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03256 533 Gene3D - 137 318 IPR008972 -
Vian2g03256 533 PANTHER MULTI-COPPER OXIDASE 27 500 IPR045087 -
Vian2g03256 533 Pfam Multicopper oxidase 143 282 IPR001117 -
Vian2g03256 533 Pfam Multicopper oxidase 15 128 IPR011707 GO:0005507
Vian2g03256 533 Gene3D - 327 525 IPR008972 -
Vian2g03256 533 CDD CuRO_1_AAO_like_1 11 126 IPR034273 GO:0005507
Vian2g03256 533 SUPERFAMILY Cupredoxins 136 319 IPR008972 -
Vian2g03256 533 Gene3D - 9 129 IPR008972 -
Vian2g03256 533 CDD CuRO_2_AAO_like_1 140 280 IPR034271 -
Vian2g03256 533 Pfam Multicopper oxidase 375 503 IPR011706 GO:0005507|GO:0016491
Vian2g03256 533 SUPERFAMILY Cupredoxins 330 521 IPR008972 -
Vian2g03256 533 SUPERFAMILY Cupredoxins 5 155 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03256 Vian-Chr2 52799257 52801052 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03256 K00423 - gmx:100782413 913.294