Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03248 ATGAGATCAGATCAGATTCCCTTGAAGAACAAAGTCTTAATTGGAATGGTTTCCAAAAGCAAAAGGGTGAGGGATGCAGCATTCTCCTCCTTCATCTTGCTTTTACTGTTGGTTGGGTTTGGTAACTCAGATTTAGGCAAAGACAGAGAAGAGTGTGCAGACAAACTTATAGGGCTGGCTAGCTGTGTTCCTTACGTTGGTGGTGAGGCCAAAACCCCAACCATAGACTGCTGCAGTGGTCTCAAAGCTGTCCTCGACAAGAGCAAGAAGTGCATCTGCATCCTCATCAAAGATCGTGATGACCCCAATCTTGGCATCAAAATCAATGCCACTCTCGCCATTCAACTACCCTCTGCTTGCAACGCACCTGCTAATATATCTCACTGTGTAGATCTTTTGCATTTAGCACCTAACTCTCCTGATGCCAAGGTGTTTGAGGGATTGCAAAAATCCGCCAAATCAAACAGTTCCACCCCAGTTTCCAGTGGTGCAGGTGGTGGTGAGGAAAAGAGTGGTATGTCTACAAAGAGGTGGCCGGTGGCAGACCTGCTTTCCTCGATCTTACTACCACTTCTCTTCCTTCTTGTTTGA 591 0.4636 MRSDQIPLKNKVLIGMVSKSKRVRDAAFSSFILLLLLVGFGNSDLGKDREECADKLIGLASCVPYVGGEAKTPTIDCCSGLKAVLDKSKKCICILIKDRDDPNLGIKINATLAIQLPSACNAPANISHCVDLLHLAPNSPDAKVFEGLQKSAKSNSSTPVSSGAGGGEEKSGMSTKRWPVADLLSSILLPLLFLLV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03248 196 Pfam Probable lipid transfer 47 129 IPR016140 -
Vian2g03248 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 130 IPR036312 -
Vian2g03248 196 MobiDBLite consensus disorder prediction 148 174 - -
Vian2g03248 196 Gene3D - 49 129 IPR036312 -
Vian2g03248 196 SMART aai_6 52 129 IPR016140 -
Vian2g03248 196 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 49 129 - -
Vian2g03248 196 MobiDBLite consensus disorder prediction 149 164 - -
Vian2g03248 196 CDD AAI_LTSS 59 121 - -
Vian2g03248 196 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 40 159 IPR043325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03248 Vian-Chr2 52739329 52740097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03248 28 194 Acyl Lipid Metabolism Gene Families AT1G55260 49.711 1.81e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03248 - - pvu:PHAVU_001G268300g 305.834