Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03244 ATGCAGGGAGCGATTGTTGATAATGACAATGATGACTATGAAGTTCCCATCCCAAGCACTCTGGATGGACCCTTCAAGCCTGTCACCGTTCCTCTTGATCAGACCTTCCGAGGAAACGCCATGGATTTGCCACACACCGATCCTCTGCTTCAAACAACCGCTCAAGGCTTCCAACCACAGCAGATATCTCTCTCCCTCTCCTCTTCTCATCACTCTGTTTACATTTCTTGGATTACAGGGGAATTCCAAATTGGGGACAACATAGAACCCTTAGATCCTGAACGTGTTGCGACCGTAGTTCGATATGGAAGGTTCCGAAGGTCCATGAGTCACCGAGCCACGGGTTATTCCCTCGTTTACAGTCAACTTCATCCTTTCGAAGGTCTTCAGAACTACACCTCTGGTATCATACATCACGTTCGTCTCACGGGTCTGAGACCCAACACACTCTATCAATATGAATGCGGAGATCCTTCTTTGTCAGCAATGAGTGATGTTCATTACTTCAGGACTATGCCAGTTTCTGGCCCCAAGAGCTACCCTAACAGAATAGCAGTGGTTGGAGACCTGGGTCTTACGTACAATACCACATCCACTTTTGACCACATCACCAGTAACCATCCCGATCTTATTTTGTTGGTTGGAGATGTTACTTATGCCGATCTTTATCTAACTAATGGTACTGGGGCAGACTGCTATTCTTGCGCATTTCCTGACACTCCCATCCATGAAACGTATCAACCTCGTTGGGATTACTGGGGAAGGTACATGCAGCCTCTGATTTCTAGTGTCCCTATAATGGTAATAGAAGGGGATCATGACATAGAACCACAAGCTGAAAACCAGACATTTGTTGCTTATAGTTCTCGATTTGCTTTCCCATCAGAAGAGAGTGGATCAACATCCACTTTATATTATTCTTTCAAAGCTGGAGGGATACATTTTATAATGCTCGGCTCCTACACATCGTATGACAAATCAGGGGACCAGTACAAGTGGCTGGAGAGGGACTTGGCTTCTGTTGACAGGGAAGTAACTCCGTGGTTGGTAGCCACATGGCATGCACCTTGGTACAGCACCTACAAGGCACATTATAGAGAAGCAGAGTGTATGAGGGTAGAGATGGAAGACTTGCTATATAAATATGGCGTTGACATTGTCTTCAATGGACATGTTAATGCGTATGAGAGAACAAACCGGGTATACAACTACACATTGGATCCTTGTGGACCTGTTTATATCACGGTTGGTGATGGTGGTAACAGGGAAAAGATGGCAACCACACATGCTGATGAACCTGGAGAGTGTCCAGAACCATCAACTACACCAGATGACTTTCTGGGTGGCTTCTGCACCTTTAATTTCACATCCGGCCCAGCGGCAGGTAACTTCTGCTGGGATCGACAGCCTGATTACAGTGCTTTCAGAGAAAGTAGCTTTGGTCATGGCATTTTGGAGGTGAAAAATGAAACGCATGCACTGTGGATTTGGCATCGCAATCAAGACTTTTATGATAGTGCCGGAGACGAGATTTACATCGTTAGGCAACCTCAAAACTGCCCACCGTTCAAGCCAGCTACATGA 1584 0.4596 MQGAIVDNDNDDYEVPIPSTLDGPFKPVTVPLDQTFRGNAMDLPHTDPLLQTTAQGFQPQQISLSLSSSHHSVYISWITGEFQIGDNIEPLDPERVATVVRYGRFRRSMSHRATGYSLVYSQLHPFEGLQNYTSGIIHHVRLTGLRPNTLYQYECGDPSLSAMSDVHYFRTMPVSGPKSYPNRIAVVGDLGLTYNTTSTFDHITSNHPDLILLVGDVTYADLYLTNGTGADCYSCAFPDTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGDHDIEPQAENQTFVAYSSRFAFPSEESGSTSTLYYSFKAGGIHFIMLGSYTSYDKSGDQYKWLERDLASVDREVTPWLVATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVNAYERTNRVYNYTLDPCGPVYITVGDGGNREKMATTHADEPGECPEPSTTPDDFLGGFCTFNFTSGPAAGNFCWDRQPDYSAFRESSFGHGILEVKNETHALWIWHRNQDFYDSAGDEIYIVRQPQNCPPFKPAT 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03244 527 FunFam Purple acid phosphatase 178 440 - -
Vian2g03244 527 CDD MPP_PAPs 178 515 IPR041792 -
Vian2g03244 527 MobiDBLite consensus disorder prediction 1 20 - -
Vian2g03244 527 Pfam Calcineurin-like phosphoesterase 183 392 IPR004843 GO:0016787
Vian2g03244 527 SUPERFAMILY Purple acid phosphatase, N-terminal domain 37 173 IPR008963 GO:0003993|GO:0046872
Vian2g03244 527 Gene3D - 58 174 - -
Vian2g03244 527 Pfam Iron/zinc purple acid phosphatase-like protein C 464 502 IPR025733 -
Vian2g03244 527 Gene3D - 451 521 IPR029052 -
Vian2g03244 527 Gene3D - 178 446 IPR029052 -
Vian2g03244 527 PANTHER ACID PHOSPHATASE RELATED 31 518 IPR039331 GO:0003993
Vian2g03244 527 Pfam Purple acid Phosphatase, N-terminal domain 59 171 IPR015914 GO:0003993|GO:0046872
Vian2g03244 527 SUPERFAMILY Metallo-dependent phosphatases 183 506 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03244 Vian-Chr2 52698971 52707890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03244 43 420 Miscellaneous Gene Families AT1G13900 25.629 7.20e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03244 K22390 - gmx:100784006 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03244 2 52698971 52707890 Vian2g03244 2 52698971 52707890 ECH