Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03227 ATGTCGCCACCGATTCCTATAAGCTCCAGCTATGCTTCCACCTTCTCGTATTCTGCTTATGTCTTTCCTTCCGTCTTTGCTCGCAGCAACTTCACCAGGATCAATCTTCACCCACCTGTCTTTTGCCAATTTCAATCTAAGGTCATTTTTGCTTCTTCCGACTTCGTCCTTGCTCGTTATTTATTTGTTTTCATTGTTTGTCAGGGCAAATTTTTAGGGGAAAATACCCGAGACGAGTGGAAAACTGTTCCTGATATTTGGAGATCTTCTGCCGAGAAGTATGGTGACAAAATAGCATTAGTAGATCCGTATCATGATCCTCCTTCAACAATGACATATAAACAGTTGGAGGATGCAATATTGGACTTTGCTGAAGGATTGAGAGTTATTGGAGTGAGACCCAGTGAAAAGCTTGCACTTTTTGCTGATAATTCTTGTCGCTGGCTTGTAGCTGATCAAGGTATGATGGCATGTGGGGCAATCAATGTGGTAAGGGGTTCGAGGTCATCAACTGAAGAACTGCTGCAAATATACAACCACTCTGAAAGTGTTGCACTAGCTGTGGACAATCCTGAAATGTGTAATCGGATAGCAAAGCTATTTTCTTTGAAGAATTCAATGAGATTTATTATTCTGCTTTGGGGAGAAAAATCAGGCCTAGTCAGTGAAGGAGAAAAGGAGGTGCCTGTCTATACTTTCATGGAACTCATACATTTGGGACAAGAGAGTCGCAGAGTATTGTTTGATTCTCTTGATAATAGGAAGCAGTACATGTATGAAGCAATCAAATCTGATGACATTGCTACTCTTGTATACACAAGTGGAACTACTGGAAATCCAAAAGGTGTTATGCTAACACATCAGAATCTTTTGCATCAGATAAGAAACTTAGGGGATATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGCATGTTGCCCTCCTGGCATGCATATGAAAGAGCTTCTGAATATTTTATCTTCTCGTGCGGTGTTGAACAAGTATACACAACTGTGAGAAAGTTGAAGGATGATTTGAGAAGATATCAACCACATTACTTGATTTCTGTCCCTTTAGTTTATGAAACTTTATACAGTGGGATCCAGAAGCAGATATCTACAAGCTCCCTTGTTAGAAAGCTTGTTGCACTCACATTTTTAAGGGCTAGCATGAGGTACATGGAATGCAGGCGTATTTATGAGGCTGGAATAAGTGGTGGTGGTAGCCTATCATCTCACGTGGATAGATTTTTTGAGGCTATTGGCGTGACTGTGCAGAATGGATATGGTTTAACAGAAACTTCACCAGTTATTGCTGCTCGAAGACTTAGTTGTAATGTTATTGGGTCTGTTGGTCATCCAATTAAGCATACGGAATTCAAAATCGTAGATTCTGAGACTGATGAAGTTCTCCCACCTGGGACGAAGGGAATTTTGAAAGTTCGAGGTCCACAATTGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCAGGTCTTAGATAGGGATGGTTGGCTGAATACTGGGGATATTGGTTGGATTGTTCCCCATCATTCATCTGGGCGGAGTCGTAATTCCAGTGGAGTAATTGTTGTGGATGGTCGTGCTAAAGACACCATTGTGCTTTCTACAGAAGGTGAAAATGTTGAACCGGGAGAGATTGAAGAAGCTGCCATGAGGAGTAGCCTCATACATCAAATTGTTGTTATTGGACAGGATAAGCGACGTTTAGGGGCTGTCATTGTTCCTAACATTGAAGAAGTCGTAAAGGCAGCAAGGGAGTCGTCGATTATAGATCCTAACAGTTCTGATGTCGGTCAGGAAAACGTGACCAGCTTAATATGTAAAGAATTAAGGACATGGACATCAGAGTCTCCATTTCAAATCGGACCAGTCCTTCTCGTAAATGACCCCTTCACGATTGATAATGGCCTTATGACACCCACCATGAAAATTCGAAGGGATAAAGTTGCGGTTCAATACAGGGACCAAATAGAGAATCTATACAAGTAA 2016 0.4132 MSPPIPISSSYASTFSYSAYVFPSVFARSNFTRINLHPPVFCQFQSKVIFASSDFVLARYLFVFIVCQGKFLGENTRDEWKTVPDIWRSSAEKYGDKIALVDPYHDPPSTMTYKQLEDAILDFAEGLRVIGVRPSEKLALFADNSCRWLVADQGMMACGAINVVRGSRSSTEELLQIYNHSESVALAVDNPEMCNRIAKLFSLKNSMRFIILLWGEKSGLVSEGEKEVPVYTFMELIHLGQESRRVLFDSLDNRKQYMYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIRNLGDIVPAEVGDRFLSMLPSWHAYERASEYFIFSCGVEQVYTTVRKLKDDLRRYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALTFLRASMRYMECRRIYEAGISGGGSLSSHVDRFFEAIGVTVQNGYGLTETSPVIAARRLSCNVIGSVGHPIKHTEFKIVDSETDEVLPPGTKGILKVRGPQLMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSSGRSRNSSGVIVVDGRAKDTIVLSTEGENVEPGEIEEAAMRSSLIHQIVVIGQDKRRLGAVIVPNIEEVVKAARESSIIDPNSSDVGQENVTSLICKELRTWTSESPFQIGPVLLVNDPFTIDNGLMTPTMKIRRDKVAVQYRDQIENLYK 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03227 671 ProSitePatterns Putative AMP-binding domain signature. 270 281 IPR020845 -
Vian2g03227 671 Gene3D - 542 668 IPR045851 -
Vian2g03227 671 Gene3D - 71 520 IPR042099 -
Vian2g03227 671 CDD LC_FACS_like 106 658 - -
Vian2g03227 671 Pfam AMP-binding enzyme 89 543 IPR000873 -
Vian2g03227 671 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 75 401 - -
Vian2g03227 671 SUPERFAMILY Acetyl-CoA synthetase-like 78 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03227 Vian-Chr2 52575109 52587937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03227 78 671 Acyl Lipid Metabolism Gene Families AT3G23790 66.049 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03227 K01897 - gmx:100782583 1110.52