Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03226 ATGTCAAAAGTGACAGATATGATGTATGATCTTATCGACAAGGCTCGATCCCGTGACGAGTCTTATGTTTCTGCCCTGGATGCTGTTTTACAGAAGCACAGCTCTACTGCATATGACCTAATTGCTGGAGAAGATCTTGCTGCTTTCCTATCGCAGTTGCATCAAGACATCAGTGACCTAAAGGCAATGCTTCAGGCCATATACATTGCTGGTCATGCCACAGAATCCTTTACTGAATTTGTTGTGGGATACGGAGAGTTATGGTCTGCACAGATGTTGTCTTTAGTAATTAAGAAACAAGGGATTGACTGCAAATGGATGGATGCGAGGGAAGTTCTTATTGTAAAACCTACTCGTTCTGATCGAGTTGATCCGGATTACTTGGAATCTGAACGAAGACTTGAGAAGTGGTACTCTCTAAATCCATCTGATGTAATCGTTGCCACAGGATTTATTGCAAGCACACCTCAGAATATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTTTCGGCAGCTATTATGGGTGCTCTCTTTAAGGCTCGCCAGATCACAATTTGGACAGATGTAGATGGCGTGTATAGTGCAGATCCCAGAAAAGTTGCTGATGCTGTGATTTTGAAGACACTGTCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCTAATGTCTTGCATCCACGCACAATAACTCCAGTTATTCGATATGGCATACCAATCATAATAAGGAACATTTTCAACCTTTCTTCTTCTGGAACAATGATCTGCCATCCTTCTATTATTGGTGATGAAGATAAGCTGATATCAAAAAGTTATGTCAAAGGCTTTGCAACCATAGACAATGTGGCACTCGTAAATGTCGAGGGAACCGGAATGGCTGGTGTTCCAGGAACTGCTAGCGCTATTTTTTCCGCAGTAAAAGAGGTTGGAGCGAATGTTATTATGATATCGCAGGCCAGTAGTGAGCATTCTGTGTGCTTTGCTGTTCCTGAGAAAGAAGTAAAAGCTGTTGCTGAGGTGTTACAGTCTTTATTTCATGGAGCTTTGGATGCTGGTCGACTTTCTCAGGTTGCCATCCATCCAAATTGTAGTATTTTGGCTGCTGTAGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCACCCTTTTCGAAGCATTGGCAAAGGCCAACATAAATGTACGTGCTGTAGCACAAGGTTGTTCTGAGTACAACATCACCGTAGTTGTAAAGCGGGAGGATTCTATAAAGGCTTTACGGGCAGTTCATTCCAGATTTTATCTCTCAAGAACCACCATAGCAATGGGCATTATTGGGCCTGGATTAATTGGAAGCACACTGATTGACCAGCTAAACGACCAGGCTGCAGTTCTTAAAGATGAACTTAACATTGATTTGCGTGTGATGGGGATCATGGGTTCTAAGTTGATGCTCCTTGATGATGATAAGGGCATCAACTTAGAGAAATGGAGAGAACTTCGAGAAGAAAAAGGGGAAGTGGCTAATTTGGAAAAATTTGTTCAAATTGTGCATGGAAATCATTTTATACCAAATTCTGTGTTAGTGGACTGCACAGCCGACTCCGTCATTGCTAGCAATTACGAAGGTTGGCTATGCAAAGGAATACATGTCATCACTCCCAACAAGAAGGCAAATTCAGGACCACTTGATGAGTATTTGAGGTTAAGAGCGCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGGGCTGGTCTTCCAATTATCAGCACTTTACGGGGCCTTCTCGAGACAGGTGACAGAATATTGCAAATTGAAGGTATCTTCAGTGGGACTTTGAGTTACATCTTTAACAACTTCAAAGATGGCCGGCTTTTTAGTGAGGTAGTAGCTGAAGCAAGGGATGCAGGTTATACTGAGCCTGATCCAAGGGATGACCTCTCAGGAACTGATGTTGCTAGAAAGGTGATAATTCTTGCAAGGGAATCAGGTTTGAAGCTAGAGCTTTCTGATATTCCCGTTGAAAATCTCGTGCCAGAACCATTAAGAGGCAGTGCATCAGCTCAAGAGTTCATGCAGCAGTTGCCAAAATTTGATCAGGAATTAGCAGAGAAATTAAAAGATGCAGAGAGTGGTGGAGAAGTGTTGAGATACGTTGGAGTGGTGGACGTGAGAAATAGCAAAGGAGTAGTAGAACTGAGAAGATACAAGAAGGATGATCCATTTGCACAAGTATCAGGATCAGATAACATGATTGCCTTCACAACAAGAAGGTACAAAACCCAACCACTCATTGTTCGTGGACCTGGAGCTGGTGCCCAAGTCACTGCTGCCGGAATATTCAGTGACATCTTACGACTTGCCTCGTATCTCGGTGCTCCATCATAG 2382 0.4286 MSKVTDMMYDLIDKARSRDESYVSALDAVLQKHSSTAYDLIAGEDLAAFLSQLHQDISDLKAMLQAIYIAGHATESFTEFVVGYGELWSAQMLSLVIKKQGIDCKWMDAREVLIVKPTRSDRVDPDYLESERRLEKWYSLNPSDVIVATGFIASTPQNIPTTLKRDGSDFSAAIMGALFKARQITIWTDVDGVYSADPRKVADAVILKTLSYQEAWEMSYFGANVLHPRTITPVIRYGIPIIIRNIFNLSSSGTMICHPSIIGDEDKLISKSYVKGFATIDNVALVNVEGTGMAGVPGTASAIFSAVKEVGANVIMISQASSEHSVCFAVPEKEVKAVAEVLQSLFHGALDAGRLSQVAIHPNCSILAAVGQKMASTPGVSATLFEALAKANINVRAVAQGCSEYNITVVVKREDSIKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLIDQLNDQAAVLKDELNIDLRVMGIMGSKLMLLDDDKGINLEKWRELREEKGEVANLEKFVQIVHGNHFIPNSVLVDCTADSVIASNYEGWLCKGIHVITPNKKANSGPLDEYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEARDAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVENLVPEPLRGSASAQEFMQQLPKFDQELAEKLKDAESGGEVLRYVGVVDVRNSKGVVELRRYKKDDPFAQVSGSDNMIAFTTRRYKTQPLIVRGPGAGAQVTAAGIFSDILRLASYLGAPS 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03226 793 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 1 259 - -
Vian2g03226 793 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 585 770 - -
Vian2g03226 793 SUPERFAMILY Carbamate kinase-like 1 258 IPR036393 -
Vian2g03226 793 PIRSF ThrA 1 790 IPR011147 GO:0004072|GO:0004412|GO:0009067
Vian2g03226 793 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 271 429 - -
Vian2g03226 793 Pfam Homoserine dehydrogenase 585 783 IPR001342 GO:0006520
Vian2g03226 793 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 432 607 IPR036291 -
Vian2g03226 793 Gene3D Dihydrodipicolinate Reductase; domain 2 596 767 - -
Vian2g03226 793 ProSiteProfiles ACT domain profile. 288 357 IPR002912 -
Vian2g03226 793 SUPERFAMILY ACT-like 270 347 IPR045865 -
Vian2g03226 793 SUPERFAMILY ACT-like 354 443 IPR045865 -
Vian2g03226 793 Pfam Amino acid kinase family 69 245 IPR001048 -
Vian2g03226 793 NCBIfam aspartate kinase 1 427 IPR001341 GO:0004072|GO:0008652
Vian2g03226 793 Pfam ACT domain 361 425 IPR027795 -
Vian2g03226 793 Gene3D - 1 259 IPR036393 -
Vian2g03226 793 Gene3D - 435 785 - -
Vian2g03226 793 CDD ACT_AKi-HSDH-ThrA-like_1 283 362 - -
Vian2g03226 793 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 435 612 - -
Vian2g03226 793 Pfam ACT domain 292 346 IPR002912 -
Vian2g03226 793 CDD AAK_AK-HSDH 1 257 IPR041743 -
Vian2g03226 793 Gene3D - 269 429 - -
Vian2g03226 793 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 596 767 - -
Vian2g03226 793 CDD ACT_AKi-HSDH-ThrA_2 364 429 - -
Vian2g03226 793 ProSitePatterns Homoserine dehydrogenase signature. 631 653 IPR019811 GO:0006520
Vian2g03226 793 PANTHER - 1 793 IPR011147 GO:0004072|GO:0004412|GO:0009067
Vian2g03226 793 Pfam Homoserine dehydrogenase, NAD binding domain 440 577 IPR005106 GO:0016491|GO:0050661
Vian2g03226 793 ProSiteProfiles ACT domain profile. 369 446 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03226 Vian-Chr2 52563426 52569097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03226 K12524 - gmx:100812202 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03226 2 52563426 52569097 Vian2g03226 2 52563426 52569097 ECH