Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03213 ATGGCTGCTTCTGGATATATATCTGCTGCCAACTTGAATGGCCTGCTTGGCGCCAGACACATATCCAATCCCAAGCTGGGTTCTGCAGATGCCAAAATTTCGTTGTCGTTTGCTGGGAGCGACTCTATGGGCGTTAATGTGCGACCCGCTACAATTCGTGCTCCTAAAAGGAACCATTTCTCTCCTCTGCGTGTCGTTTGCGTCGATTATCCACGACCGGAGCTTGAAAACACCGTTAATTTCGTCGAAGCTGCTTACTTGTCTTCCACCTTTCGTGCTTCTCCGCGTCCACTAGAACCGTTGAAGGTCGTTATTGCCGGTGCAGGATTGGCTGGTTTATCGACTGCAAAGTATTTGGCTGATGCTGGGCATAAGCCTATATTGCTGGAAGCTAGAGACGTTCTAGGTGGAAAGATTGCTGCTTGGAAAGATGAGGATGGAGACTGGTATGAAACAGGTCTACACATTTTCTTTGGGGCTTACCCTAATGTGCAGAACCTATTTGGCGAACTTGGCATTAATGATCGGTTACAATGGAAGGAGCATTCCATGATTTTTGCTATGCCAAATAAGCCCGGAGAGTTTAGTCGATTTGATTTTCTCGAAATCCTTCCATCCCCGTTAAATGGAATCTGGGCTATATTAAAGAACAATGAGATGCTGACATGGCCAGAGAAAGTCAAATTTGCAATTGGGCTTCTGCCAGCTATGCTTGGTGGACAGGCATATGTTGAGGCTCAAGATGGTCTTTCTGTTAAAGAATGGATGATAAAACAGGGTGTTCCTGATCGAGTAACCGATGAGGTGTTCATAGCAATGTCGAAGGCACTAAACTTCATCAATCCTGATGAACTTTCAATGCAATGTATATTGATTGCTTTAAACCGATTCCTTCAGGAAAAACATGGTTCTAAGATGGCATTTTTGGATGGCAATCCCCCTGAAAGACTTTGTATGCCAATAGTTGATCATATTCAGTCCTTGGGTGGCGAAGTTCATCTCAGTTCACGCATTCAAAAAATTGAGCTAAATGATGATGGAACAGTGAAGAACTTCTTACTAAGTAATGGGAAGGTGATGGAGGGAGATGCTTACGTGTTTGCAGCTCCAGTGGATATTCTGAAGCTTCTTTTACCTGACAACTGGAAGGGGATTCCATATTTCCAGAGATTGGACAAATTAGTTGGAGTCCCAGTCATAAATGTTCACATATGGTTTGACAGAAAACTGAAGAACACATATGATCACCTTCTCTTTAGCAGAAGTCCCCTTCTGAGTGTATATGCTGACATGTCTGTAACTTGCAAGGAATATTATGACCCAAACCGGTCTATGTTAGAGTTGGTTTTTGCACCAGCTGAAGAATGGATTTCACGTAGTGATGAAGATATCATTGCAGCAACAATGTCTGAGCTTGCCAAACTCTTTCCTGATGAAATTTCTGCCGACCAAAGCAAAGCTAAGATTATCAAGTACCATGTTGTTAAAACACCAAGGTCTGTTTACAAAACTGTTCCAAATTGTGAACCTTGCCGTCCGGTACAAAGATCTCCTATTGAAGGTTTCTACTTAGCTGGAGATTACACAAAACAAAAATATTTAGCTTCAATGGAAGGTGCTGTTCTTTCAGGGAAGCTGTGTGCACAAGCAATTGTACAGGATTGTGAAGTACTTGCTGGTCGAGGCCAGAAAAGAATGGCTCAAACGAGTGTTGTCTGA 1719 0.4299 MAASGYISAANLNGLLGARHISNPKLGSADAKISLSFAGSDSMGVNVRPATIRAPKRNHFSPLRVVCVDYPRPELENTVNFVEAAYLSSTFRASPRPLEPLKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFLEILPSPLNGIWAILKNNEMLTWPEKVKFAIGLLPAMLGGQAYVEAQDGLSVKEWMIKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVHLSSRIQKIELNDDGTVKNFLLSNGKVMEGDAYVFAAPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWISRSDEDIIAATMSELAKLFPDEISADQSKAKIIKYHVVKTPRSVYKTVPNCEPCRPVQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDCEVLAGRGQKRMAQTSVV 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03213 572 Gene3D - 100 559 IPR036188 -
Vian2g03213 572 Pfam Flavin containing amine oxidoreductase 110 551 IPR002937 GO:0016491
Vian2g03213 572 SUPERFAMILY FAD/NAD(P)-binding domain 100 554 IPR036188 -
Vian2g03213 572 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 98 560 - -
Vian2g03213 572 NCBIfam 15-cis-phytoene desaturase 102 552 IPR014102 GO:0016117|GO:0016166
Vian2g03213 572 PANTHER PROTOPORPHYRINOGEN OXIDASE 91 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03213 Vian-Chr2 52462149 52468834 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03213 K02293 - gmx:547970 1070.07