Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03188 ATGTACGGATCGGAGAATAACCGCGATGATTCTGAGCGAACCGCTTTCAGAAGAGCAGAGAAGAAATACAAGCTTTACTACGACAACAATGCATCTTCCAAGAACAAAAAGAAAAAACAACCTAAACCAGTGGATTTAACGGAGGTTCTTGACTTCAGATCTATTCTAGAATGCTATCTTCAAAGCGGTGCACTTCCTCCGGGTGTTATTGTTCTCCACGAGAACTTCACCTCTCCGGTTTTCTCTTTGCAAAATCGCCCAGGCTTTTATTTTATTCCTGGAGCATTAACCATTGAGGAACAGTGTAGTTTGATAAAGGAGAGTTTGACTGATTTTCCGCAGCCCCCTAACAGAACAAATCACAATGCCATGTATGGTCCAATTCAGGATGTTTTTGGTGCTGCTAAGGAAGGGAAAGTTTTGGTCGAAGACAACTCTCCAATTTCTTCATCAGAAACTGGTGCTGATATAGATAATGGAGATTGTAAGGAATGGAAATTTACTACCCAAAAGGAAGCGTCTTTGAGAAAGTGCAAATCCGTTTCTGCTTCTGCGTTGCTTCGGAAGTTACGATGGAGCACCCTGGGCCTGCAGTTTGATTGGTCCAAGCGGAATTACGATATGTCTCTCCCACATAACAAAATCCCTGAACCACTGTGTGAACTTGCCAAACAATTGGCCAAGCCTGCTTTACCTGCTGGTGTTGAATTCAGACCTGAAGCTGCAATTGTGAATTACTTTGGTTCAGGGGACACGCTGGGTGGTCACCTTGATGACATGGAAGCAGATTGGAGCAAGCCTATAGTTAGTTTAAGTCTGTGTTGCAAGGCTATATTTCTTTTGGGAGGAAAATCCAGAGAGGATACTCCTCTGGCAATGTTCCTTCGAAGTGGCGATGTGGTTCTTATGGCTGGAGATGCAAGGGAATGCTTTCATGGGGTTCCTCGAATCTTCACAGATGAAGAAAATGCTGAAATAGGCCATCTCGAGACACGGTTGACGCATGAAGATGATCTCTGTTTCTTAAAATACATCCAAACTTCTAGAATCAACATTAATATCAGACAAGTTTTTTGA 1077 0.429 MYGSENNRDDSERTAFRRAEKKYKLYYDNNASSKNKKKKQPKPVDLTEVLDFRSILECYLQSGALPPGVIVLHENFTSPVFSLQNRPGFYFIPGALTIEEQCSLIKESLTDFPQPPNRTNHNAMYGPIQDVFGAAKEGKVLVEDNSPISSSETGADIDNGDCKEWKFTTQKEASLRKCKSVSASALLRKLRWSTLGLQFDWSKRNYDMSLPHNKIPEPLCELAKQLAKPALPAGVEFRPEAAIVNYFGSGDTLGGHLDDMEADWSKPIVSLSLCCKAIFLLGGKSREDTPLAMFLRSGDVVLMAGDARECFHGVPRIFTDEENAEIGHLETRLTHEDDLCFLKYIQTSRININIRQVF 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03188 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 238 358 IPR005123 -
Vian2g03188 358 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 6 357 IPR004574 -
Vian2g03188 358 Pfam 2OG-Fe(II) oxygenase superfamily 175 355 IPR027450 -
Vian2g03188 358 SUPERFAMILY Clavaminate synthase-like 87 357 - -
Vian2g03188 358 Gene3D - 150 357 IPR037151 -
Vian2g03188 358 FunFam Alpha-ketoglutarate-dependent dioxygenase alkB 148 357 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03188 K10765 - gmx:100797068 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03188 2 52325609 52328085 Vian2g03188 2 52325609 52328085 ECH