Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03183 ATGCAAACTAAGAAAAAAACTTCTAGGCGAAATGCCAGTCAAGAACGTGGCAGTACTAAGGTTTCAAGATCACAGAGGAAGGTCTCTGAAAATGGACGAGCTGCTCAAAAGAAAGTGACAGACCTAATTACGTCATCTGCTAGAAAGAATAAATCTTTTAGCACTCTCGAGAATAAAGCTACAGAGCCTGTCCCGTCAACAGATTTGAATTATGAGTACCAGTTTATGGACAGTGGGACTTCCAATCTTTGTTTGGAAAATGATGCAGTTGATGGTGTTTCACTGGATTTTATGGGTTGTAACAATGAAGCTGCGCATCTTGAGTCTGGAACTATATTTTCTCCTGGGTTTCACTTATCCAAAAATCCTGGAGGAAAAGTTGTTGATAGAGTTGATTTTATCAAAATTTTTCAGAATGAAGACCACAAGAGAATTTCTCCTTGCCAAGAAATAAAATCACCACAGGAAGATACAGTAGATGGTCCTGGCAGTCAAGACTTTGACACTGCAATGGAAATAGACATGAACAATGCATCCAACTACTCTAATTCAGGGAGCTGTGGCAATCAGATGCATGCTTCAGGCACAGAAAAGGTGAATGGTTGCAATTCTGATTTTGATGGAAATGGTCTTTCCATGGAAGTTTCTGCCATATATCTTGCCATGAAAAACTCAAAGCTAGAATGTGTTGATGAGCATGGTCAGGATCCCATGTCCTCTGAAATATGCACAGAGGAGGATGAGTTCGAGGACTTTGATGATTTTGACCCATACTTATTCATAAAGACCTTACCGGACCTGTCATCAGTGGTTCCAACTTTTAGACGATTGTTGTTACCTAAGCAGACACGTAGTTGCCCTTCTACTACCCTTGTTCTGGATTTGGATGAAACTTTGGTGCATTCTACACTGGAACCATGTGAGGATGTTGACTTCACTTTTCCTATTAATTTCAATTGTGAGGAGCACATTGTCTATGTACGCTGCCGCCCTCATCTCAAAGATTTCCTTGAGAGAGTTTCTGGACTTTTCGAGATTATTATATTTACAGCCAGTCAAAGTATTTATGCTGAGCAACTTCTAAACGTTCTTGATCCAAAGCGGAAGATATTTCGCCACCGTGTGTACCGTGAGTCCTGTGTTTATGTCGAGGGGAATTATCTCAAAGATTTAACAGTGCTGGGTCGTGATTTGGCACACGTTATAATAATTGACAATTCCCCACAGGCATTTGGATTCCAGGTGGATAATGGAATACCGATTGAGAGTTGGTTTGAAGATCGTTCAGATCGAGAATTGCTTTCATTACTTCCTTTTTTGGAGAGCTTGGTTGGTGTTGAAGATGTCCGGCCACTAATTGCAAAGAAATTCAACCTGCGGGGGAAAATTGCTGCAGCCGTGCATCCTCTAAACACAAATAGAAGAGATTTCTTATCAGAATGA 1443 0.4068 MQTKKKTSRRNASQERGSTKVSRSQRKVSENGRAAQKKVTDLITSSARKNKSFSTLENKATEPVPSTDLNYEYQFMDSGTSNLCLENDAVDGVSLDFMGCNNEAAHLESGTIFSPGFHLSKNPGGKVVDRVDFIKIFQNEDHKRISPCQEIKSPQEDTVDGPGSQDFDTAMEIDMNNASNYSNSGSCGNQMHASGTEKVNGCNSDFDGNGLSMEVSAIYLAMKNSKLECVDEHGQDPMSSEICTEEDEFEDFDDFDPYLFIKTLPDLSSVVPTFRRLLLPKQTRSCPSTTLVLDLDETLVHSTLEPCEDVDFTFPINFNCEEHIVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVYVEGNYLKDLTVLGRDLAHVIIIDNSPQAFGFQVDNGIPIESWFEDRSDRELLSLLPFLESLVGVEDVRPLIAKKFNLRGKIAAAVHPLNTNRRDFLSE 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03183 480 SMART forpap2 287 431 IPR004274 -
Vian2g03183 480 CDD HAD_FCP1-like 290 421 - -
Vian2g03183 480 PANTHER DULLARD PROTEIN PHOSPHATASE 58 456 - -
Vian2g03183 480 ProSiteProfiles FCP1 homology domain profile. 284 443 IPR004274 -
Vian2g03183 480 Gene3D - 274 458 IPR023214 -
Vian2g03183 480 MobiDBLite consensus disorder prediction 1 43 - -
Vian2g03183 480 SUPERFAMILY HAD-like 278 454 IPR036412 -
Vian2g03183 480 FunFam CTD small phosphatase-like protein 2 277 457 - -
Vian2g03183 480 MobiDBLite consensus disorder prediction 20 34 - -
Vian2g03183 480 Pfam NLI interacting factor-like phosphatase 290 450 IPR004274 -
Vian2g03183 480 NCBIfam dullard-like phosphatase domain 289 452 IPR011948 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03183 Vian-Chr2 52277075 52280160 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03183 K17616 - gmx:100804307 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03183 2 52277075 52280160 Vian2g03183 2 52277075 52280160 ECH