Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03181 ATGGACTGCTGGAGTTTGCAGTTGCAGTCACGGGCATTTGGCGTTCTGCGATCACAGAAGGGAATGGAGTATTCTCAAGATGATTTCGATCGGTTACTGTTATTCGAGCACACGCGGAAGACCGCTGAAGCAAACTACGCTAAGAATCCTCTTGACGCCGATAATCTGACCAGGTGGGGGGGAGCTCTGATCGAGTTGTCGGCTTTCGAGAAGCCTAAGGATTCTAAGGCGATGATTAATGATGCCCTTTCAAAGCTGGAAGAGGCTTTGCTGATCAATCCAACGAAGCACGACACTCTTTGGTACTTGGGAAATGCACACACGTCATGTGGGTTTCTAACGCCGGATATCAGTGAGGCAAAGGATTATTTTGAGAAGGCACATGAGTATTTCCAGAAAGCTTTTGATGAGGATCCTGAAAATGACCTCTATAGGAAGTCCTTGGAAATTGCTGTGAAGGCTCCAGAACTACACATGGAGATCCATAATAACGAGCTTGGTCCGATGAGTAATGCGGGATCCTCTGCTACTTCAAAAGGAAAGGAATCTAAACGGCAGAAGAACAGTGACTTTAAGTATGACATATTTGGATGGGTTATTCTTGCGGTGAGTATAGTAGCATGGGTGGGAATGGCCAAATCTAACATTCCACCGTCACCTCCTAGATAA 669 0.4604 MDCWSLQLQSRAFGVLRSQKGMEYSQDDFDRLLLFEHTRKTAEANYAKNPLDADNLTRWGGALIELSAFEKPKDSKAMINDALSKLEEALLINPTKHDTLWYLGNAHTSCGFLTPDISEAKDYFEKAHEYFQKAFDEDPENDLYRKSLEIAVKAPELHMEIHNNELGPMSNAGSSATSKGKESKRQKNSDFKYDIFGWVILAVSIVAWVGMAKSNIPPSPPR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03181 222 MobiDBLite consensus disorder prediction 164 184 - -
Vian2g03181 222 Gene3D Tetratricopeptide repeat domain 19 173 IPR011990 GO:0005515
Vian2g03181 222 SUPERFAMILY TPR-like 42 149 IPR011990 GO:0005515
Vian2g03181 222 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 22 222 IPR010547 GO:0005742|GO:0045040
Vian2g03181 222 Pfam Plant specific mitochondrial import receptor subunit TOM20 29 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03181 Vian-Chr2 52263644 52266913 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03181 - - gmx:100775949 351.288