Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03166 ATGTGGGGGCTTCTTCGAACTAGAACGTGTTTGCGATATTCAGAGGCCCTTCTTCTTCATCAACCATGGAAGAAGAAGGTAGGGTTCTGTTCTTTGTCTGCCGTTGACGGCCGTAATTGCCTTCTGGATCTGCCGGAGATCGAGAAGGTTCTGACGGATATCAAAGCTGACGACGTTAAGGTGATACCGGTTCCCAAGCACTGCGATTGGGCCGATTTCATGGTTCTCGCCACTGGCAGGTCCACCTGGCACGTCAAGAACATAGCCCAAGCCCTAATTTACAAGGCACCACACCCTCCTTCCTTCGCCAAACAGAAACAGAGAGGAGCTGAACGAATGATGCTACCGAGTGTAGAAGGTGAAGAGGGAGGAAAGTGGATAGTCATTGACTCTGGTAAAGTGATAGTTCATGCACTTGATGAAAAGGCCAGAGCTTACTACAATTTGGAGGGTCTTTGGACCCGAGGGACAAGTCAAAATGAACCTGATGGGGATTTACAAAAAGCTTTGGTGAAGGTTCGTCGAAAAAACAATTCGAAGAAACCTGCACAAAAGAATGCTTAA 564 0.477 MWGLLRTRTCLRYSEALLLHQPWKKKVGFCSLSAVDGRNCLLDLPEIEKVLTDIKADDVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALIYKAPHPPSFAKQKQRGAERMMLPSVEGEEGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTRGTSQNEPDGDLQKALVKVRRKNNSKKPAQKNA 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03166 187 Hamap Ribosomal silencing factor RsfS [rsfS]. 34 154 IPR004394 -
Vian2g03166 187 Pfam Ribosomal silencing factor during starvation 46 153 - -
Vian2g03166 187 SUPERFAMILY Nucleotidyltransferase 46 158 IPR043519 -
Vian2g03166 187 NCBIfam ribosome silencing factor 46 153 IPR004394 -
Vian2g03166 187 FunFam Mitochondrial assembly of ribosomal large subunit 1 42 166 - -
Vian2g03166 187 PANTHER IOJAP SUPERFAMILY ORTHOLOG 36 165 IPR004394 -
Vian2g03166 187 Gene3D Beta Polymerase, domain 2 43 165 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03166 Vian-Chr2 52135677 52138303 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03166 - - var:108320297 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03166 2 52135677 52138303 Vian2g03166 2 52135677 52138303 ECH