Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03163 ATGAACCACTCTGAGGAAAACAATGATGTTGATGTTGCTGCTGCCGCTGCTAGACAGAAGAAAATTGACGATTGGCTTCCGGTGACTGCTTCACGAAATGCGAAATGGTGGTATTCAACTTTCCACAATCTCACAGCCATGGTTGGTGCAGGTGTTCTCACCCTTCCCTTTGCCATGTCAAACATGGGCTGGGGTCCTGGAGCTACCGTGCTTTTGTTGTCATGGATCATCACCCTTTATACGCTGTGGCAAATGGTGGAGATGCACGAAATGGTGCCTGGGAAGAGATTCGATAGGTACCATGAATTGGGTCGGCATGCCTTTGGAGACAAGTTGGGTCTCTGGATTGTGATTCCTCAACAGATCATTGTCGAAGTTGGAACATGCATCGTTTATACAATCACTGGGGCCAAGTCATTGAAGAAAGTTCATGATACCATTTGCCCTGATTGCAGAGATATTAGAACCTCTTACTGGATTGTTATCTTTGCTTCTGTCAACTTCGTTCTCGCACAATTAATGCCCCAACTTCAACTCCATCTCTGCTATTTCTTTCGGTACTCAACCATCTCTTGGTGTGCTTCTATAGCCAAGGGTGTTGAACCAGATGTGAATTATGGTCTCCGAGCCACCAATTCCACTGATGCAGTGTTCAACTTTCTTTCTGCATTGGGCGATGTAGCATTTGCCTACGCAGGCCACAACGTGGTTTTGGAAATTCAAGCAACCATGCCTTCAACCCCAGAGACACCTTCCAAGAAACCCATGTGGAGAGGAGTTATTTTGGCATACATAGGAGTTGCATTCTGCTATTTACCAGTTGCTTTCATTGGATACTATGTCTTTGGAAACTCGGTTGATGATAATATCCTCATCACACTAGAACGCCCTTCTTGGCTCATTGCCACCGCTAACTTGTTTGTCTTTGCTCACGTTGTGTTTGCCATGCCGGTGTTTGATATGATCGAAACCTACATGGTTACGAAGTTGAATTTTCCACCTTCTGCTGTTCTACGAGTAACAACTCGAAGTGTATATGTTGCATTGACTACGCTGGTTGCCATATGTATCCCTTTCTTTGGCTCTCTTCTTGGATTTCTTGGAGGCTTTGCCTCTGCTCCAACTTCATTTTTTTTGCCCTGTATCATATGGCTCAAGCTCATTAAGCCCAAGAGATATGGCTTGTCTTGGACAATCAACTGGATCTGCATTGTTCTTGGGGTATTGTTGATGATACTATCTCCTATTGCTGCTATGAGAAATATTATTATGTCAGCCAAAGACTATAAGTTTTTCTCATGA 1302 0.4409 MNHSEENNDVDVAAAAARQKKIDDWLPVTASRNAKWWYSTFHNLTAMVGAGVLTLPFAMSNMGWGPGATVLLLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGRHAFGDKLGLWIVIPQQIIVEVGTCIVYTITGAKSLKKVHDTICPDCRDIRTSYWIVIFASVNFVLAQLMPQLQLHLCYFFRYSTISWCASIAKGVEPDVNYGLRATNSTDAVFNFLSALGDVAFAYAGHNVVLEIQATMPSTPETPSKKPMWRGVILAYIGVAFCYLPVAFIGYYVFGNSVDDNILITLERPSWLIATANLFVFAHVVFAMPVFDMIETYMVTKLNFPPSAVLRVTTRSVYVALTTLVAICIPFFGSLLGFLGGFASAPTSFFLPCIIWLKLIKPKRYGLSWTINWICIVLGVLLMILSPIAAMRNIIMSAKDYKFFS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03163 433 FunFam Lysine histidine transporter 1 29 428 - -
Vian2g03163 433 Pfam Transmembrane amino acid transporter protein 33 418 IPR013057 -
Vian2g03163 433 PANTHER OS05G0424000 PROTEIN-RELATED 34 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03163 Vian-Chr2 52119442 52121842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03163 15 433 Organic Solute Cotransporters AT1G24400 69.302 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03163 K26385 - gmx:100786115 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03163 2 52119442 52121842 Vian2g03163 2 52119442 52121842 ECH