Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03153 ATGGCACACGCTTTGTCCTCTAATCTGGCTCTTAACCTTCCTACATCGAGATATCTTCTTCACTCCAGACCAACCCAGTTGAAGCCAGTGAAGTTCATGGTCATGGGGGATGCAAGAGAAAAGCTTGACCACATCCCAAAACCCAACAAGAACCACCATCCTCTTCCCAAAAAGAAAGTTGCCCCTCCTGCACCCATAGGGTTGTGGGACAGGTTTCCTACGGCAAGAACAATGCAAGAGATGATGGAGACGATGGAGAGGATGATGGAGGACCCTTTTGCATTTAGCACGCTTGAGTGGCCTTCATCACCCTTACCGAGTGAGGGTGTGGGAGGGTACAGGAGAAGAGGAAGGGCACCATGGGAGATCAAAGAGGGAGAGAATGAGTACAAGATGAGGTTTGACATGCCTGGGATGAACAAAGAGGATGTGAAAGTTTGGGTGGAGGAAAAGATGCTTGTGGTTAAAGCAGAAAAGGCACCAAAGAAGAAAGAGATTGTTCAACAGGATCAACGGCCGAGGCAACCAGAAGAGGAAGAAGAAGAGGGATGGTCTGCAAAGAGCTATGGCAGGTATAGCAGTAGGATTGCTCTGCCCGACAATGTGCAGTTTGAGAATATTAAGGCTGAGGTTAAGGATGGTGTTCTCTACATAGCCATTCCCAAAGCTATTACTAGTTACTCCAACATCCTAGATATCCAAGTTCAATGA 711 0.474 MAHALSSNLALNLPTSRYLLHSRPTQLKPVKFMVMGDAREKLDHIPKPNKNHHPLPKKKVAPPAPIGLWDRFPTARTMQEMMETMERMMEDPFAFSTLEWPSSPLPSEGVGGYRRRGRAPWEIKEGENEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKAPKKKEIVQQDQRPRQPEEEEEEGWSAKSYGRYSSRIALPDNVQFENIKAEVKDGVLYIAIPKAITSYSNILDIQVQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03153 236 Gene3D - 68 235 IPR008978 -
Vian2g03153 236 CDD ACD_sHsps-like 122 222 - -
Vian2g03153 236 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 20 236 IPR044587 GO:0009408
Vian2g03153 236 Pfam Hsp20/alpha crystallin family 122 235 IPR002068 -
Vian2g03153 236 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 112 236 IPR002068 -
Vian2g03153 236 MobiDBLite consensus disorder prediction 162 186 - -
Vian2g03153 236 SUPERFAMILY HSP20-like chaperones 102 234 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03153 Vian-Chr2 52033297 52034397 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03153 K13993 - gmx:100811966 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03153 2 52033297 52034397 Vian2g03153 2 52033297 52034397 ECH