Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03135 ATGTTAATTGGGAAGTGGGATGAAGCAATGTACTATGTACTAGGGGATCCAACCACTAAGCCAAAAGGTTATGATCCGATGACAGAAGCTGCGATATTGTGGGAAAGGGACAGCTCTGTATCCAAGACAAGATACAACCTCTCTCCTTTTGCAATTTCCTTGAATGAAATATTACCTGGTTTATTAGAAAAGTTGCCCCCAACTGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAGTTGGCAAATGCAGAGAAACTGAGACTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCGAGATGGTTTAAGAAGGATGAGGATGGTTGCTACCGATATATTGGTGGTAAGATGATAAGGAAGATTCTGCTTACTTGTCTTCCACATCCGAGTTCAGCGGCCATGATTCATTCTAACTCTCTTCAAAATCAGATTGTTACAAGGCTGAAACTGGGAAGCCCTAATTTTCTGTTGAACACCCACCCACCTTTCGGTGATGCCAACCCTCTGAGTAAAGAAAGGAACTATTTTTATGTCGTTCGGGATGATTTGTTGCACCCACTTGTTAATGGCAACAAAGCAAGAAAACTTGATGGATTACTTCCTGTCCTTCAACGTTATTCTGTCACTGATGTGGTTACATGTGGAGGTTGTCAGAGTGCTCACACAGCTGCTGTTGCGGTTCTGTGTGCTGAGAGAGGAATTGTGTCACATCTGCTTCTACGAGGAGAGCAGCCTGAAATTTTGACTGGCTATAACTTGATATCTTCTATGTATGGGAATGTTACATATGTTCCAAGAACTATTTATGCGAATAGGGAAGAGATGCTAAAGAGCTATGCTGAGTCAGTGGCTGGTAACAATGGTTCTGTCCTATGGCTTGGTGATATCATTGAACCTTCTTCGGCAACTGAATTGTCTACTTCTCCAAATTTCATGCAAATGGATGTGAGTAGAAGTGAGGGGAACCATCGACGAAATATTTTAGTCGTCAAAGAAGGTGCTGGTGATTCTGTTGCTCTACTAGGTGTTATTCGCTTAGTGGAATACTTGTCACATAATCATTTACTTGGAAAAGAAAGGCCCATGAAATTTGTTGTAGATGCTGGTACTGGCACAACGGCTATTGGTTTAGGACTTGCAGCTCATTGTTTACGGCTCCCATGGGAGGTATATGCTGTCATGCTGGCTGACAAAATTGAAGGATACAGAAAACAGGAGGTGCATTTGATTTCTGAATTTAAGAAGCATTTTAACATTGAGTTTATTGACGAAATTGTAAATAGAAAAGATGCTGGGATTGTGAATTGGGTGGAACGTGGTCGTCCAAGAAAGTTTGGTAATGTTTTGGAGGGAGAAGTGGAAAGGTGTCAACAAATTGCCCAACAAACTGGAATTTTGGTGGATCCTGTGTATACATTAGCTGCTTGGGAAACAGCAATGCTTCTCTCCAGTAACGATGCTGAAGAACCAGAAGTGGCGTTGCTTCACACTGGAGGCACGTTGGGTATGTTTGGACTGGCACAGAGGTACAAAAATTATTTTGGCATGCTGAAAAAAGGGGTGTTCTAA 1605 0.4199 MLIGKWDEAMYYVLGDPTTKPKGYDPMTEAAILWERDSSVSKTRYNLSPFAISLNEILPGLLEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFKKDEDGCYRYIGGKMIRKILLTCLPHPSSAAMIHSNSLQNQIVTRLKLGSPNFLLNTHPPFGDANPLSKERNYFYVVRDDLLHPLVNGNKARKLDGLLPVLQRYSVTDVVTCGGCQSAHTAAVAVLCAERGIVSHLLLRGEQPEILTGYNLISSMYGNVTYVPRTIYANREEMLKSYAESVAGNNGSVLWLGDIIEPSSATELSTSPNFMQMDVSRSEGNHRRNILVVKEGAGDSVALLGVIRLVEYLSHNHLLGKERPMKFVVDAGTGTTAIGLGLAAHCLRLPWEVYAVMLADKIEGYRKQEVHLISEFKKHFNIEFIDEIVNRKDAGIVNWVERGRPRKFGNVLEGEVERCQQIAQQTGILVDPVYTLAAWETAMLLSSNDAEEPEVALLHTGGTLGMFGLAQRYKNYFGMLKKGVF 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03135 534 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 174 523 IPR036052 -
Vian2g03135 534 FunFam D-cysteine desulfhydrase 2 mitochondrial 326 525 - -
Vian2g03135 534 Gene3D - 316 525 IPR036052 -
Vian2g03135 534 Pfam Oxysterol-binding protein 3 122 IPR000648 GO:0008289
Vian2g03135 534 FunFam D-cysteine desulfhydrase 2, mitochondrial 203 304 - -
Vian2g03135 534 Gene3D - 76 155 - -
Vian2g03135 534 Coils Coil 87 107 - -
Vian2g03135 534 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 159 527 IPR027278 -
Vian2g03135 534 SUPERFAMILY Oxysterol-binding protein-like 2 125 IPR037239 -
Vian2g03135 534 FunFam Oxysterol-binding protein-related protein 1C 76 132 - -
Vian2g03135 534 Gene3D - 203 306 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03135 Vian-Chr2 51916079 51922879 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03135 K05396 - gmx:100801680 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03135 2 51916079 51922879 Vian2g03135 2 51916079 51922879 ECH