Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03127 ATGGCGGAGCTCCGCCACTCCTCTTCCCTCGGCAGCCGAGCCTCCAATTCTCCGATGAAGCGTGACGCCGTCGCCGTCGCCGTCGCCGTCGGCGGCGCTGCCGATTCCTCTCCACTCATTCCCGACAGCCACCTCACCGACGACGACGAGCACGATCGCCACTCATCCAAGGAGCGCGACCGGCATGTCTGCTCCTTCTTGAACGACGACCCTAGGGTTTCGCCTCACAACTCCAGGATCTCTCTGTTTTTCACCTTCCTTCTTCTACTCGTTGGTTTAGTTTCTGTATTCACAATCTTCCATAAACTCAATGCCCCTTACTTGTGTAAAAAGGACGGCATTGTTCTTCATTGCCCACATGTCAAGGAATCGCCATCTCTTTGGGAAAATCCTTTCTCATCCACGACATCTTGGAGGCCCTGTGCCGAGCGCCGGGATGGCGTTTTATCAGAGCTTCCTCATGAAAATGAAACAAACGGCTATATATTCATCCATGCTGAGGGTGGTCTAAATCAGCAAAGAATTGCGATTTGCAATGCTGTGGCTGTAGCCAAAATAATGAATGCCACTCTTATTTTGCCTGTTTTGAAGCAGGATCAAATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCATTTCATTGACTACCTTAAGTATGACGTTCGTATTGTACGTGATATCCCACAATGGTTTACTGATAAATCAGAGCTATTTTCTAGCATAAGACGGACTGTAAAAAACATTCCAAAATATGCACCGGCACAATTTTACATCGATAATGTTCTGCCCCGGATCAAGGAGAAGAAGATTATGGCTCTTAAACCATTTGTTGACAGACTGGGATATGACAATGTTCCTCCTGAAATCAACAAGCTGAGATGTAGAGTTAATTATCATGCACTGAAATTTCTTCCTGATATAGAGCAGATGGCTGATTCACTGGCATCAAGAATGAGAAACCGAACTGGAAATTCAAATCCTTATATGGCTTTGCATCTTAGATTTGAGAAAGGAATGGTGGGACTATCGTTCTGTGATTTTGTGGGGACAAGAGAGGAGAAAGTCAAAATGGCAGAGTATAGAAAAAAGGAGTGGCCTCGACGGTACAAGAATGGTTCCCATCTGTGGCAATTAGCTCTACAGAAGCGTAAGGAAGGACGATGTCCTCTAGAGCCTGGAGAAGTGGCCGTTATTCTTCGGGCTATGGGCTATCCTAAGGAAACTCAAATTTACGTTGCTTCTGGACAGGTTTATGGTGGACAGAACCGGATGGCTCCACTAAGAAATATGTTCCCTAATCTGGTTACTAAGGAGGAGCTAGCAACCAAAGAGGAGTTAGATGGTTTCAGAAAGCATGTGACAAGCCTAGCAGCTCTTGACTTCTTAGTGTGCTTGAAGTCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGCTGATTATCGGCGCCCGTAGATACATGGGTCACCGTCTAAAGTCAATTAAGCCTGACAAAGGGCTAATGTCAAAGTCTTTTGGGGATCCGTACATGGGTTGGGCTACTTTTGTAGAAGATGTTGTTGTTACTCACCAGACGCGAACGGGATTGCCAGAAGAGACTTTCCCTAACTATGATCTCTGGGAGAACCCTCTGACTCCATGCATGTGTAGAGCCTGA 1674 0.4594 MAELRHSSSLGSRASNSPMKRDAVAVAVAVGGAADSSPLIPDSHLTDDDEHDRHSSKERDRHVCSFLNDDPRVSPHNSRISLFFTFLLLLVGLVSVFTIFHKLNAPYLCKKDGIVLHCPHVKESPSLWENPFSSTTSWRPCAERRDGVLSELPHENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPQWFTDKSELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMADSLASRMRNRTGNSNPYMALHLRFEKGMVGLSFCDFVGTREEKVKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03127 557 MobiDBLite consensus disorder prediction 42 60 - -
Vian2g03127 557 Gene3D - 303 500 - -
Vian2g03127 557 Pfam GDP-fucose protein O-fucosyltransferase 161 493 IPR019378 -
Vian2g03127 557 MobiDBLite consensus disorder prediction 1 20 - -
Vian2g03127 557 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 98 556 - -
Vian2g03127 557 PIRSF UCP009360 42 557 IPR024709 -
Vian2g03127 557 MobiDBLite consensus disorder prediction 34 60 - -
Vian2g03127 557 CDD O-FucT_plant 161 496 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03127 Vian-Chr2 51844657 51849435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03127 125 555 Miscellaneous Gene Families AT2G37980 37.330 1.31e-94 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03127 - - vra:106753406 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03127 2 51844657 51849435 Vian2g03127 2 51844657 51849435 ECH