Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03120 ATGACCAAACTGAAAGAGCTGATTGGGAGGTTGAAGGACAAAGCGTCGCAGGGCAAAGCCGCCATCCTCTCCAAACGCGCCACTCTCTCTCTCCTACGCGCCACTAGCCACGATCCCTTCACCCCTCCCACCTCCAGTCACCTCTCCACGTTCCTCATCGCCGGCGATGGATCACGCGTCACGGCCTCCGCCGCCATGGAGCTTCTCATGGACCGCCTACAGAGCACCCAGAGCTCTGCCGTGGCGCTCAAGTGCCTCATCGCCGTCCACTACGTGTTAAAGCGCGGCAGCTTCATCATGAGGGATCAGCTTCCGTACAGCTGCGGCGGCGGCGGCGGCAGGAACTACCTTAACCTCTCCAAATTCCGCGACAGGAGCAGTCCCGTATCCTGGGAACTGTCTTCGTGGGTACGATGGTACGCTAAACACGTGGAACAGCTTCTCTGGGCTTCCAGGATCGTCGGCTTCTTCCTCGGCGTTGAAGCTGAAGAAGACTCAAGTCAAGGGTGGTGGACGAAAGCAGGAGAAGAGAGAGCTTCAGGCCTTAGCAACAGTGAGGTGTTGAGAGAGACGGAGGCTCTGTTGGCGGTTATTGAAGGGATTGGGGGAATACCCGACGCAGCATCCATGGAAGGGAACAAACTAGTTGGTGAGATGAGGAGTCTGGTAGAAGAGGATGTGGTTGTGGCGCTGAGCGAGGTTTTGGTTAGAGTTAACGAGTTGAGGGAGCGTTTTGGGTGTCTGAGTTTTGGAGAAGTGGTGGAGTTGGTTTACGTGTTGAACAGATTGGAGAAGTGCAAAGAGACGGTGGAAGAGGTGGTGGTGGTGGTGGTGGTGGCAGAGAAACAGAGATTATTATGGGATGTAGTGAGAGAAGTAAAGGAGAAGGTTGAGAAGGTGTTTAGGGAAGAAGGGAAAACCATGAGAACACATAGACACAGGGCAACGAAGTCAGAAAGGTTTGAATTTCCAACGCTTTTGATCGATTCTGTTGATTTGGTTCGGTTTCCCTCCGCAAGGTTGCTGTGA 1029 0.5394 MTKLKELIGRLKDKASQGKAAILSKRATLSLLRATSHDPFTPPTSSHLSTFLIAGDGSRVTASAAMELLMDRLQSTQSSAVALKCLIAVHYVLKRGSFIMRDQLPYSCGGGGGRNYLNLSKFRDRSSPVSWELSSWVRWYAKHVEQLLWASRIVGFFLGVEAEEDSSQGWWTKAGEERASGLSNSEVLRETEALLAVIEGIGGIPDAASMEGNKLVGEMRSLVEEDVVVALSEVLVRVNELRERFGCLSFGEVVELVYVLNRLEKCKETVEEVVVVVVVAEKQRLLWDVVREVKEKVEKVFREEGKTMRTHRHRATKSERFEFPTLLIDSVDLVRFPSARLL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03120 342 FunFam Putative clathrin assembly protein At4g40080 3 157 - -
Vian2g03120 342 SMART enth_2 25 158 IPR013809 -
Vian2g03120 342 SUPERFAMILY ENTH/VHS domain 29 155 IPR008942 -
Vian2g03120 342 Pfam ANTH domain 30 157 IPR011417 GO:0005543
Vian2g03120 342 Gene3D - 3 156 IPR008942 -
Vian2g03120 342 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 274 IPR045192 GO:0048268|GO:0072583
Vian2g03120 342 ProSiteProfiles ENTH domain profile. 19 158 IPR013809 -
Vian2g03120 342 CDD ANTH_N_AP180_plant 29 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03120 Vian-Chr2 51809266 51810822 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03120 - K20043 gmx:100808393 401.749