Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian2g03085 | ATGGCAACCCCAACGCGCCTCCTCCCTCTCCTCTTTTCTCTACTCTCGCTATGCTTCGTCTCAACCGTTAGATCGGACGGAGATTGTGTCTACTCGGTTTATATTCGGACGGGCTCCACCATCAATGGAGGAACCGATTCAATAATTGGACTCAAGGTCTACGACGCGCTCGGCGACGGTATATACATCACCGATCTCGAGGCCTGGGGCGGGTTAATGGAGCCGGGTCACAACTACTACGAGCGGGGCAATCTCGACATTTTCAGCGGTAGAGGCCCATGCTTGGACCAGCCCGTTTGCGCCATCAATATAACTTCGGACGGGTCGGGGGCCCATCATGGCTGGTACGTTAACTACGTCGAGGTCACTTCTGCTGGAGTCCACGCGGCCTGCTCTAGTTCGCAGTTCACGGTGGAGCAGTGGCTCGCAACCGACACGTCGCCTTATCAGCTCTGGACCGTAAGAAACAACTGCCCAAACGTCTTGAGTCAGGCCCGTTCTAAAGCCCATTTCACCGATGTCGTCAGCTCTCGAAATGGGCCCGGGTCCGGTTTCTCTGTTTCGGCCCTCAAACGTTCGCGGGCCGGCATGTAA | 594 | 0.5623 | MATPTRLLPLLFSLLSLCFVSTVRSDGDCVYSVYIRTGSTINGGTDSIIGLKVYDALGDGIYITDLEAWGGLMEPGHNYYERGNLDIFSGRGPCLDQPVCAINITSDGSGAHHGWYVNYVEVTSAGVHAACSSSQFTVEQWLATDTSPYQLWTVRNNCPNVLSQARSKAHFTDVVSSRNGPGSGFSVSALKRSRAGM | 197 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian2g03085 | 197 | Gene3D | PLAT/LH2 domain | 30 | 150 | - | - | |
| Vian2g03085 | 197 | CDD | PLAT_plant_stress | 29 | 157 | - | - | |
| Vian2g03085 | 197 | Pfam | PLAT/LH2 domain | 31 | 150 | IPR001024 | GO:0005515 | |
| Vian2g03085 | 197 | ProSiteProfiles | PLAT domain profile. | 29 | 156 | IPR001024 | GO:0005515 | |
| Vian2g03085 | 197 | PANTHER | PLAT DOMAIN-CONTAINING PROTEIN | 26 | 164 | - | - | |
| Vian2g03085 | 197 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 30 | 147 | IPR036392 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian2g03085 | Vian-Chr2 | 51432863 | 51433552 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian2g03085 | - | - | pvu:PHAVU_001G251400g | 315.849 |