Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03078 ATGCTGCTTGGAAAGCGCCCTCGCCCACCGATTATGAAACGAACTACCAGCATGAGTGGTGGCATGGCCGTGGAATCGCCGACGACCGACGAGGAACTCGTGTCTGATAACCCTCACCATGATCACGAGCCTAACATCAAAGTCGATCCACTTCTCGTTGCCATGGGAAGACATAATGAATCTGCGCCTGAAAATGTTTCTGAGGCCAAAGGGTCATCTTATGAATTATACGGGCAACGTTTGATGGGCATGGGCGTACCACTTTCCCCGACAACCTCAAATAACCCTCGTCACAGTCACAACCACACAACAAACACTGTCATAAACACTACTTCTCACTTTCTTCGGACTTGCGGCCTCTGCAAGTGTCGCTTGGCACCTGATCGACGAGACATCTATATGTATAGGGGGGATACTGCATTTTGCAGCTTGGAGTGTAGGGAGAAACAGATGAAGCAAGATCAGAGAAAAGAAAAGTGGAAGGCAGGGTCTAACAAGGAGCACCACCGTGCATCACCACCTGGGAAGGCTTCCACCAAAAGTGAAACGGCTGCGTGTAATTGA 564 0.4982 MLLGKRPRPPIMKRTTSMSGGMAVESPTTDEELVSDNPHHDHEPNIKVDPLLVAMGRHNESAPENVSEAKGSSYELYGQRLMGMGVPLSPTTSNNPRHSHNHTTNTVINTTSHFLRTCGLCKCRLAPDRRDIYMYRGDTAFCSLECREKQMKQDQRKEKWKAGSNKEHHRASPPGKASTKSETAACN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03078 187 PANTHER FCS-LIKE ZINC FINGER 5 1 179 - -
Vian2g03078 187 MobiDBLite consensus disorder prediction 153 175 - -
Vian2g03078 187 MobiDBLite consensus disorder prediction 1 45 - -
Vian2g03078 187 MobiDBLite consensus disorder prediction 153 187 - -
Vian2g03078 187 Pfam zinc-finger of the FCS-type, C2-C2 110 157 IPR007650 -
Vian2g03078 187 ProSiteProfiles Zinc finger FLZ-type profile. 113 158 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03078 Vian-Chr2 51354205 51354959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03078 - - pvu:PHAVU_001G250900g 294.664