Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03045 ATGGTATCGGTTGATAACGGAATTTTGAATCCCAAAGATGAAATTGAGGAATGTAATGGCAGTAAAGTGAAGGAGTTTGTTTCTATAGATATTTCAACTACTCAAGAAACATTGCCGAGCAGTGAGGATTCCCAGAGAAAGCTTCAAGGCACTTTAAGTTCTTCTGTTTCTAATAGGATAAATTTTCTTAAATTTGGTTCGGCATCTGCCAAATTCAAGAGGCTTGCTATTGAGAGAGACAAGATTTCAATATCTGTGCCTTCTCCTCGTTCAAAGGGCATAAGAGCACGTTTCAGAGGCATGTTTTCTCTGAAACTTGATGGGAGTTCTGTCAAGAAGATGTGCGTAGAGTGGATTAGAAGTCCAGTGAACATGGCCATTTTTGTGTGGATCACATGTGTTGCTATTTCGGGTGCAATTCTGTTCCTGGTCATGACAGGCATGTTGAATGGTGTGCTTCCGAAGAAGTCTCAGAGAAATGCATGGTTTGAAATAAATAACCAAATACTCAATGCATTGTTTACACTCATGTGCTTGTATCAACACCCTAAGAGATTCTACCACCTTGTTCTTCTGATCAGATGGAAACCAAATGACATCTCTAGACTTAGAAATTTGTACTGCAAGAATGGTACTTACAAGCCCCATGAGTGGACACATATGATGGTAGTGGTTATTCTCCTTCATGTTAACTGTTTCGCCCAATATGCACTTTGTGCTCTAAACTTGGGTTATAAAAGGTCTGAGAGACCCGCCATTGGAGTTGGAATATGTATATCTTTTGCAATTGCTGCTCCTGCGGTTGCTGGTTTGTACACCATTCTCAGTCCACTTGGGAAGGACTATGACTGTGACACGGATGAAGAACTACAGGTGCAAATTACTGGCTCTCAAAGGCAAGAGCAGCCGAGAGAGAAACCATGCGAGAAGAAGTATTCATTTGCATCAAAAGATCAACAAAGATTTGTTGAAAATAGACCAAAGTGGAGTGGAGGAATACTTGACATTTGGAGCGATATTTCCTTAGCGTATCTCTCACTTTTCTGCACCTTTTGTGTCTTTGGGTGGAATATGGAGAGACATGGCTTTGGAAACATGTATGTCCATATTGCCACTTTTACGCTATTTTGTATGGCACCTTTCTGGATTTTCATTTTGGCTTCCGTTAACATAGATGATGACAATGTTAGGCAGGCTCTGGGAGCTGTTGGAATCGTTCTTTGTTTTCTTGGTTTACTGTATGGTGGATTCTGGAGGATCCAAATGAGAAAGAGGTTCAACTTACCTGCCTATGACTTCTGTTTTGGCAAACCTTCAGCTTCTGATTGCACACTTTGGCTATGTTGTTCTTGGTGCTCTCTTGCTCAAGAAGCAAGAACAGGAAATAACTACGATATTGTGATAGATAAGTTCTCCAGGAAACAAACTGATGATACTGGCAACCAACCTTCAATCTCACCTTTGGCTAGGGAAGACGTAGTATCAACCAACTCTGGCACAAGTTCAGTGAGTGGCAACTCTTCACCTTTTATGATGAAAACCAATGTGTTAAAGGGAGATTATAGAGCAGATAGTATTGTAGAAAAAGAGAATTGTGAAAGAGGTGACGATGGAACAATGAATCCACCGGATCCTCTATTCATACAAAGAGAGTGA 1656 0.407 MVSVDNGILNPKDEIEECNGSKVKEFVSIDISTTQETLPSSEDSQRKLQGTLSSSVSNRINFLKFGSASAKFKRLAIERDKISISVPSPRSKGIRARFRGMFSLKLDGSSVKKMCVEWIRSPVNMAIFVWITCVAISGAILFLVMTGMLNGVLPKKSQRNAWFEINNQILNALFTLMCLYQHPKRFYHLVLLIRWKPNDISRLRNLYCKNGTYKPHEWTHMMVVVILLHVNCFAQYALCALNLGYKRSERPAIGVGICISFAIAAPAVAGLYTILSPLGKDYDCDTDEELQVQITGSQRQEQPREKPCEKKYSFASKDQQRFVENRPKWSGGILDIWSDISLAYLSLFCTFCVFGWNMERHGFGNMYVHIATFTLFCMAPFWIFILASVNIDDDNVRQALGAVGIVLCFLGLLYGGFWRIQMRKRFNLPAYDFCFGKPSASDCTLWLCCSWCSLAQEARTGNNYDIVIDKFSRKQTDDTGNQPSISPLAREDVVSTNSGTSSVSGNSSPFMMKTNVLKGDYRADSIVEKENCERGDDGTMNPPDPLFIQRE 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03045 551 Pfam PLAC8 family 329 459 IPR006461 -
Vian2g03045 551 MobiDBLite consensus disorder prediction 474 506 - -
Vian2g03045 551 MobiDBLite consensus disorder prediction 477 506 - -
Vian2g03045 551 NCBIfam uncharacterized Cys-rich domain 328 460 IPR006461 -
Vian2g03045 551 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 550 - -
Vian2g03045 551 MobiDBLite consensus disorder prediction 528 551 - -
Vian2g03045 551 Pfam Protein of unknown function (DUF2985) 117 195 IPR021369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03045 Vian-Chr2 51112262 51113917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03045 - - gmx:100811964 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03045 2 51112262 51113917 Vian7g01518 7 23976615 23978297 ECH
Vian2g03045 2 51112262 51113917 Vian2g03045 2 51112262 51113917 ECH
Vian2g03045 2 51112262 51113917 Vian7g01518 7 23976615 23978297 PCT