Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03040 ATGAAGCCACACACTCAGGCTTCTTCTTTCGCCACTCCACTCCCGCACGTGCCTTTCTTTCGCGCCACCGCTTCCTCACGTGACGCCCCGGCGGAATCTCTTCGTGCCGCCGCCGCCGATGAATTCCGTCGCATCTGGACTGCGAAACGCCGCCGCGTCAACCTGTCCGTCCGCCACTCCACATGCGTCGCCGCGGCTTCGAATCCGGGTGGCTCCGGTGGCGATTATAGTCAACCTCGGAGCAGCCGGCGCGGCGTGCTGATGGCACCGTTCCTGGCTGCCGGCGCGTCGGTTCTGTTATCGTCGGCGTCGAGGGCGGAGGAGAAGCCGGCGGAATTGGCTCCGACAGCACCTAAGCTGGAGGAGGCGAAAAAGGAGGAGGAGGAAGTGATAACGTCGAGGATTTACGACGCGGCGGTGATAGGGGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAGGTGTGGGAGAAGTTGATGAATGCGCGAGTGGTTTATTTGGGGGAAGCGGAACAGGTTCCGGTTCGAGACGATAGGGAATTGGAGCTTGAGATTGTGAAGAATTTGAATAGGCGCTGTTCGGAGAAGGAAAAAAAACTGTCTCTTGCGCTGGAAGCTTTTCCCTCTAATCTTCAGGAACCGCTCAATCAGTATATGGACAAGAAGATAGATGGAGACACCTTGAAGTCTTATACGTTGCATTGGCCACCTCAAAGATGGCAGGAGTATGAACCTATTCTGAGCTACTGTCGTGAAAATGGAATCCGTGTAGTCGCTTGTGGTACTCCGCTGAAGATCTTAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGCTGAACGTAAACTTTATGCTCCTCCAGCTGGGTCGGGCTTTGTATCAGGCTTTACTTCTATCTCACGTAGACCTTCAGTCGATAGTACTCAAAATCTGTCCATTCCTTTTGGTCCGAGCTCATACCTTTCTGCCCAGGCTAAAGTAGTTGATGAGTATTCTATGTCCCAGGTTATCTTACAAAATGTGGTTGATGGAGGGTCCACTGGTATGTTAATTGTTGTGACTGGTGCAAGCCATGTTACGTATGGATCTAGAGGAACTGGAGTGCCAGCTAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGTAGTTATATTACTTGACCCTGAAAGACAATTCATTCGCAGAGAAGGAGAAGTTCCCGTGGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGATCGTGCTGAGATTGCTCGCGTAATGAATGCTGCTGGGCGGAGGCGAGATGCCCTACCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCTCCAGAGGTTTTGCAGAACTTCTTTGATCTAGAGCAGTATCCTCTGATTTCAGAACTCACTCACCGTTTCGGGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCCATAGAAGAAGCCATATCAATAACAACTACATTGTTGGCGCAATATGAAAAGCGGAAAGATAATTTTTTCCAAGAGCTTGACTACGTTATTACAGACACTATCAGAGGATCAGTAGTTGATTTTTTTACAGTGTGGCTCCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGATGAAAGCCCCTGACAACATTGGTTCTCTAATGGGACTTCTAGGTTCCATCCCGGACAATGCATTTCAAAAGAATCTTGCAGGAACAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGGCTAAAACTTGCTAGTGTTGGATTTATTTCAAGCATTGGAGCCGTGGCTTCATCAAATTCTCTATATGGAATCCGTAAATTCCTTAATCCAGCCATTGTCACTGAGCAACGGGTTATAAGGTCACCAATACTGAAAACAGCTGTCATATATGCTTGCTTTCTTGGAATTTCTGCAAATCTCCGTTATCAGATAATTGCTGGGATAGTGGAGCATCGGATTTCTGAACAGTTTGCTTCCCAGACATTCTTTGTAAATATGCTTTCTTTTGTAGCACGGACTGTCAATTCCTATTGGGGAACCCAGCAATGGATTGACCTAGCGCGCTTTACTGGCCTGCAAGTTAGAAAGACAGAGTCGCCAACATCAGATTCTCCGAATAGTGCTGCAATTTTATGCAACGAAGCAGAAGAAGCCACCATTGATGAGATAGAAAAATAA 2226 0.4708 MKPHTQASSFATPLPHVPFFRATASSRDAPAESLRAAAADEFRRIWTAKRRRVNLSVRHSTCVAAASNPGGSGGDYSQPRSSRRGVLMAPFLAAGASVLLSSASRAEEKPAELAPTAPKLEEAKKEEEEVITSRIYDAAVIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDRELELEIVKNLNRRCSEKEKKLSLALEAFPSNLQEPLNQYMDKKIDGDTLKSYTLHWPPQRWQEYEPILSYCRENGIRVVACGTPLKILRTVQAEGIRGLTKAERKLYAPPAGSGFVSGFTSISRRPSVDSTQNLSIPFGPSSYLSAQAKVVDEYSMSQVILQNVVDGGSTGMLIVVTGASHVTYGSRGTGVPARISGKIQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFGGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKDNFFQELDYVITDTIRGSVVDFFTVWLPAPTLSFLSYADEMKAPDNIGSLMGLLGSIPDNAFQKNLAGTNWNLNHRIASVVFGGLKLASVGFISSIGAVASSNSLYGIRKFLNPAIVTEQRVIRSPILKTAVIYACFLGISANLRYQIIAGIVEHRISEQFASQTFFVNMLSFVARTVNSYWGTQQWIDLARFTGLQVRKTESPTSDSPNSAAILCNEAEEATIDEIEK 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03040 741 Pfam Haem-binding uptake, Tiki superfamily, ChaN 154 373 IPR007314 -
Vian2g03040 741 Pfam Protein RETICULATA-related 480 664 IPR021825 -
Vian2g03040 741 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 30 739 - -
Vian2g03040 741 MobiDBLite consensus disorder prediction 105 125 - -
Vian2g03040 741 Gene3D - 146 412 - -
Vian2g03040 741 SUPERFAMILY EreA/ChaN-like 153 409 - -
Vian2g03040 741 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03040 Vian-Chr2 51068780 51074347 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03040 - - gmx:100810366 1272.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03040 2 51068780 51074347 Vian2g03040 2 51068780 51074347 ECH