Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03030 ATGATTCCTCGGCTTCTGGGTGTCTATATAAACCGCCAATTCTTAATCAACGTTCGACATATCCTACGTTCCTTTGTTGCAGCGATTCAGACATCATACGATTTCGTTGCCATGTCCAATCCCAAATCAGAGACAGTGTCAGAATCCTCCGTTTCAGAGCCTCCACCGACGCAACCCTCTGTGCCCATTTCCTACCCAATCAAAACACTTGAGGAGTTGGAGTCTCGCTCGTATTTCGACTCCTTTCACTACCCTTTCAACAGGGCTTCGGTTCCCATTCTCAATGGAGGTTCTTCTTCATTGCCCCAGAGGCGAAGATTGCTTGTGTGCCATGACATGGCTGGGGGCTACTTGGATGACAAGTGGATTCAAGGTGGCACTAACCCTGATGCTTATGCCATTTGGCATTGGCACTTGATCGATGTTTTTGTCTACTTTTCACACAGTCTCGTTACTCTTCCTCCTCCCTCCTGGACTAACACTGCTCATCGCCACGGCGTTAAGGTGTTGGGGACTTTCATTACTGAATGGGATGAGGGAAGGACTGCCTGTAATACATTGCTTTCAACAAAGGAAACTGCACATATGTATGCAGAACGTCTGGCAGAGCTTGCCGCTGATTTAGGTTTCGATGGGTGGCTAATAAATATGGAAGTGAATTTGGATCCGGGTCAAATTCCTAATTTGATAGAGTTTGTAGACCATTTATCACTAACAATGCATTCTTCTGTTCCTGGATCGTTAGTGCTATGGTATGACAGTGTTACAGTTGAGGGTAAATTGAATTGGCAAGATCAACTAAATGAACATAATAAGCCATTCTTTGATATATGTGATGGAATATTTGTGAACTATACATGGAAGGAAGACTATCCAAGGCTCTCTGCAGCTGTTGCCAATGAGCGGAAGTTCGATGTGTACATGGGAATCGATGTATTTGGAAGGAACACATATGGTGGTGGACAGTGGAATGTAGATGTTGCTCTTGATTTACTAAGAAAGAATGATGTCTCTGCTGCAATATTTGCTCCTGGATGGGTCTATGAGACAAAGCAAGCACCAGATTTTGAGACTGCTCAGAATAGGGACGTGGTTACCATATTTCAGTCGATGGTGACAATGTATCAGATAGTACTTGGTGCAACATTTCTTGCCAAGGTCTCCAGCTTGAAGGAAGCATCGTATAGTGGAGGGGGAAACATTAAATTCAAAGGATCCCTCGAAGAGAAAATTTACTTTGAGAGAAAAATATTTCAAGTAGGGTTTCTTTTGAGCGAGTTGCCTGTCCACTTTATCTATACTGTGAAATCGGATAGCAATTCTTCATTAGGACTTAAGCTCGAGTTCACCTCCACTGGCGATGGCAGAAGAGCATCTATGCTTCTTGCATCCCGGGCAGTGAATCACTTTTCAGACAAGTTCAGCAAAGTAATCATGACTCGTGAACGCAAGGGATTTTCCTCTGGATGGGTTATAAATGAAGGTGTAGTTGCAATGAGTGGATACACTTTAACAGAAATCCATGCAGTGTGCTATAGATCAGATTCAAATGACAATGATGGAACTGTGGCTTCCCCATCAGATTATTTTGCACTTCTTGGTCACATCACAATCAAGACTGTGGACTATAAGTCAGATTTTCCTCTGTCTTCTTCCTGGCTAGTTGATGGCACCTGCATAAAATGGACATCAGACCCTCTGGGTTCAAAGACCCTTGATGTTAAGATTTCTTGGAAATTAAAACATGAGAATAGTTATCTATTTCTGAAGTTCAACGTTTACTTGGTAAAATTATCAAAACAAGCAGGTGGCAATCCAGTTACAACATTGGAGGATGTAAAAGAGTACCTTGGAGTAGCACAAGTAAGCTGTTTCTATGTTTCTGACCTCAAAGTTCCTTCAGACACTTCTACTCTCAAATTTATAATACAAGTCTGCAGTGTAGATGGGACAATTCAGGAATTGGACGAGTCTCCATATTATGAATTGGAGGTTGAAGGTCCTTAA 2007 0.4235 MIPRLLGVYINRQFLINVRHILRSFVAAIQTSYDFVAMSNPKSETVSESSVSEPPPTQPSVPISYPIKTLEELESRSYFDSFHYPFNRASVPILNGGSSSLPQRRRLLVCHDMAGGYLDDKWIQGGTNPDAYAIWHWHLIDVFVYFSHSLVTLPPPSWTNTAHRHGVKVLGTFITEWDEGRTACNTLLSTKETAHMYAERLAELAADLGFDGWLINMEVNLDPGQIPNLIEFVDHLSLTMHSSVPGSLVLWYDSVTVEGKLNWQDQLNEHNKPFFDICDGIFVNYTWKEDYPRLSAAVANERKFDVYMGIDVFGRNTYGGGQWNVDVALDLLRKNDVSAAIFAPGWVYETKQAPDFETAQNRDVVTIFQSMVTMYQIVLGATFLAKVSSLKEASYSGGGNIKFKGSLEEKIYFERKIFQVGFLLSELPVHFIYTVKSDSNSSLGLKLEFTSTGDGRRASMLLASRAVNHFSDKFSKVIMTRERKGFSSGWVINEGVVAMSGYTLTEIHAVCYRSDSNDNDGTVASPSDYFALLGHITIKTVDYKSDFPLSSSWLVDGTCIKWTSDPLGSKTLDVKISWKLKHENSYLFLKFNVYLVKLSKQAGGNPVTTLEDVKEYLGVAQVSCFYVSDLKVPSDTSTLKFIIQVCSVDGTIQELDESPYYELEVEGP 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03030 668 FunFam cytosolic endo-beta-N-acetylglucosaminidase 56 376 - -
Vian2g03030 668 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 33 362 IPR032979 GO:0033925
Vian2g03030 668 Pfam Glycosyl hydrolase family 85 117 362 IPR005201 GO:0005737|GO:0033925
Vian2g03030 668 CDD GH85_ENGase 108 357 - -
Vian2g03030 668 Gene3D Glycosidases 57 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03030 Vian-Chr2 50970125 50979432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03030 57 666 Glycoside Hydrolase AT5G05460 51.364 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03030 K01227 - gmx:100806475 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03030 2 50970125 50979432 Vian2g03030 2 50970125 50979432 ECH