Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02992 ATGAGAATCACGTTGGAGCCGAGCTCGGAGCCGAGCCCAAGCCGCTCCCAAACTCCCAAAGACGAAGTCGAGTGGGTCCCACTTGCCAAGCACCCTCTCTTCACCGCACACGGCGGCGCCACCGTTGGTGGTTACCGGAATCTCCTGGCCTGGGACGGAGCATCGCGCCTCTACTTCTGGGACACGAACAGCCGCATTCTTCACCGCCTATCTCTCCGACTTGGCGACCCCGATCCCTCTTCCGTCCTCGCCTCTTCTCCCTCGAAGGTGTTGCAAGCAGACGCCGAGCTCGATTTCGACGTCCACAAAATCTCCGTCAACAGGAACGGAACAGCGATACTTCTTTTCGGTTCCGAAACGCTCTCTGTTATGTATCTTTACGGACGCGCATCTAAGAAGGACGTGAACTTGATTTGCAGGACTATTACTGTTGGTTCTCAGACATATTCCACTGGTGGCAATGATATTCGGGTGTTACAAGCATTATGGCACCCTTACAGTGATACTCATTTGGGGATTCTTTCTTCTGACTCAGTTTTCAGACTTTTCAACCTTGCTGTGGATCCTTTGCAACCAGAGCAAGAATATTATTTACAGCCTGTCGAGCCTGGTAGATTTAGAAATGCCTCATCAGTTTGCCCAGTTGATTTTTTTTTTGGGGGTGACCATTTATGGGACAGGTTCAGTGTATTTGTTTTGTTCAGTAATGGGGCTATCTATGTACTTTGCCCAGTTGTGCCATTTGGAAGTCTCTTCAAATGTGAGTCTTTGGTAGAAATATACAATGATGCTCACACATTTGGAATAATATCAGCCAACCCTGTTGCTGCGAGTAATTCAAAGTTGGCAATTTCCTGGTTAGAAGCATCATTTCCTGAGTTACAGAACCAAGATACTGAAGGAGACAGCCTGTCCTTGCTAAGAGCTCATGCTTATTCTTTGTTTGATGCTTCTCTTGTCTTGCAGGGACCTCTGCAAAGAGTAGGTCAGGATGGAAATGGAGATTCAGTAGGTTGTAGTACAGAATGTGAAGGTCGTGCAGTTAGTTTTCTCTACAATTTAGTCAGCAAAGACTCAATTTTGGTTACTGCCTGGAGTGGTGGGCAATTGCAAATAGATGCTCTTGCCGATGAGATCCAACCTGTCTGGTGTGTTGGTAGTCCGCCTCGTCTCCGTGTTGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAGTCAATTACCTGCAGCAGTTTGGGGAAGGTTGATCATAATGCCTGGTTGGGTAATCCACCCCCTTTGCTGAGACTGGCTATTGTTGATTTGGCTCTACCACGAAGAGCAGAAAGTGGTTATAATATTTCTTTGTTCATTGATATGCTTATGCCAGAAAGAATATTTTCCCTTCATGATGGAGGGATTGACTCGATAGTTTTACATTTTCTTCCTTTTACAAGTCAGTCGAATGGCAAGGATGATACAATGAAGACACCGTCTGTGCACCCTGTGTTAAATACTTGCCAGAGTGGATACACCTCAGAACCCTCATTTTGTGGCTTTGTGTCTTTATCGGATTCATTTGGATATTCATGGATTGTATCTATTACACTTTCTCTTGAGTGTGTTGTGCTTGAGATGAAAAGTTGGAATCTCTTGCTTCCTGTAAGCATTGATATGGAGAAGAAACCCATTTCATCAGAGGGGGAATCAAAGGAGAGGGATATACCAACAATAATTAGCAAAGAACTACTTAGTGGACCGAAGGAGGTACTTGTTCCCCATGCCTCTCCAAGTTTGCGTTCTGTTGCAGCTGATTCAATTGAAGGTCGATCAACATTACATCAGTATTTCAAGCTGTTTCATGAAACTTATGTGGAGTATGGACATAAGGTGTACCTGGAGCTCAAGCATCACGCACCTCAGTTGAATAAAATCATTAATGACCAACATTCTCGCTTAGGCGAAGCACAGCAGAAACTTTTGAACGTTGAGAAGAAAGAGGCTATATTACAGAAAAGGTTAGGTCGTGCTATTCAAATGCACAATTCTTTGGAAGAGCGCTTGCAACAATTAAGGAACTTACCTTGTGCTCACAAAAAACCGCTGTCCAGAGCAGAGCGGCAGTTTAAATCGGAGCTTGACCGCTTTAAGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGATGCGGTAAGTGCAAGGCTGAGAAGGCACTTGCAAGCTTCGAAAGCTAATCAGCAACAGAAAACAGCTGGGAAGAAAATTAATGCTGTAGACAGTCAGATATCCATGCTCAAATCGTCTCTTGAAAAACTCTCACTGGTAAATACTGAGAATTCAAAGAAAGTTAAACTTGTGGAGTCTACATTGAAAAACAAAGAAAGAAGTAGCGGCAGAGAATCAAGCCTGCCTTTGCCCTAA 2406 0.4443 MRITLEPSSEPSPSRSQTPKDEVEWVPLAKHPLFTAHGGATVGGYRNLLAWDGASRLYFWDTNSRILHRLSLRLGDPDPSSVLASSPSKVLQADAELDFDVHKISVNRNGTAILLFGSETLSVMYLYGRASKKDVNLICRTITVGSQTYSTGGNDIRVLQALWHPYSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPVEPGRFRNASSVCPVDFFFGGDHLWDRFSVFVLFSNGAIYVLCPVVPFGSLFKCESLVEIYNDAHTFGIISANPVAASNSKLAISWLEASFPELQNQDTEGDSLSLLRAHAYSLFDASLVLQGPLQRVGQDGNGDSVGCSTECEGRAVSFLYNLVSKDSILVTAWSGGQLQIDALADEIQPVWCVGSPPRLRVDSHDQILGLAMICESITCSSLGKVDHNAWLGNPPPLLRLAIVDLALPRRAESGYNISLFIDMLMPERIFSLHDGGIDSIVLHFLPFTSQSNGKDDTMKTPSVHPVLNTCQSGYTSEPSFCGFVSLSDSFGYSWIVSITLSLECVVLEMKSWNLLLPVSIDMEKKPISSEGESKERDIPTIISKELLSGPKEVLVPHASPSLRSVAADSIEGRSTLHQYFKLFHETYVEYGHKVYLELKHHAPQLNKIINDQHSRLGEAQQKLLNVEKKEAILQKRLGRAIQMHNSLEERLQQLRNLPCAHKKPLSRAERQFKSELDRFKEVELDALHSSVDAVSARLRRHLQASKANQQQKTAGKKINAVDSQISMLKSSLEKLSLVNTENSKKVKLVESTLKNKERSSGRESSLPLP 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02992 801 MobiDBLite consensus disorder prediction 1 21 - -
Vian2g02992 801 Pfam Nuclear pore component 45 209 IPR019321 -
Vian2g02992 801 Pfam Nuclear pore component 448 782 IPR019321 -
Vian2g02992 801 PANTHER NUCLEOPORIN NUP84-RELATED 16 790 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Vian2g02992 801 Coils Coil 641 689 - -
Vian2g02992 801 MobiDBLite consensus disorder prediction 781 801 - -
Vian2g02992 801 MobiDBLite consensus disorder prediction 1 19 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02992 K14318 - gmx:100801853 1417.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02992 2 50563801 50568754 Vian2g02992 2 50563801 50568754 ECH