Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02971 ATGGAATCTGATAACGGGCTTGCTGTGGAGGAAGAGAAACGTGTTATCGGGGTAACAACCAAGGTGGAGAATATAAAGAAAGAAGATGAAAAGGACTGTAACGGTGCAGAAATTCAGACCAAGAAGGAAGTATCTAAACCCATTTCTGCTGCAAATAAAAATTCAAAAGGTGCCACTAAGGAAACTGGTGGGAGAGCAACTGTTGCTTCCAAGAGCAACAAATATGCCAAAGATAATTTGAAGGGTCTGAGTTCAATAGCTCAAAAACAAAGTCCATCACTTTCCCAAAGCATTTCTTTCCCAGCCAGATCATCTCGGGAAGATACTATGCAGAAAAGCATTGATGGGTATATTCTGAAGACAAAAGTTAAACACGTTCAAGGTTATGGGATTAGAGCTGAAGCCCCCATTCGTCATTTAAACAACCCCACAAACTCACTTGCCAAAACCCACGCTGCCATGCCTGATTTGAAACGCTCTGCGTTTGGAAGGACTACTACAGTTACTCCAGCCACCAAGAGCCAAATTTCTGAGACATCGTTACTTGTTGATCATGTGTCAAACAGGGCAAAGTCTGGAAAACCAAATAAAGATGATGATGATTGCCATTCCGCAACTTCAAGTGCTACTCCTCGTCTGAGAAGCAGTGGAGTTGGGTTTTCCTTTCGATTGGAAGAAAGAGCTGAAAAGCGAAAGGAGTTTTTCTCAAAGTTGGAGGAAAAAACTCTAGCCAAGGAAGCAGAGAAAACTAACCTACAAGCAAAATCAAAGGAAAACCAAGAGGCAGAGATCAAACTATTGAGGAAGAGCCTGACATTCAAAGCCACTCCAATGCCAAATTTCTACAAGGAACCACCTCCAAAAGTTGAGCTTAAGAAGATACCAACAACACGCCCAAAATCCCCAAAGCTTGGAAGGCACAAGGAACCTACAATGAACAACAATTCAGGAGAAGATAAGTGTTGCTCAAGTCCGCGTGGGAAACAACAGCAAAATGATTCAAACAAGGGTAAGGGTCATAAGGATGTGATTTCAAAGAAACAAATCCCAAAAACCCACTCCAAGCTGAAGTCTGAGGAAAATGTAACCACAGAAAACAAAGAATTCCAAGTTCCAGATGACAACAATTCTGAATGCAAAAATGACATGGAGTTACAATGTGAACCAGGTCATGCATCAAATACTGCACTGCTTCTAAATTCGACTACGAAGGAGCTTGTGTCGTATGAGGTTATTGTTGGAGTGTAG 1248 0.4175 MESDNGLAVEEEKRVIGVTTKVENIKKEDEKDCNGAEIQTKKEVSKPISAANKNSKGATKETGGRATVASKSNKYAKDNLKGLSSIAQKQSPSLSQSISFPARSSREDTMQKSIDGYILKTKVKHVQGYGIRAEAPIRHLNNPTNSLAKTHAAMPDLKRSAFGRTTTVTPATKSQISETSLLVDHVSNRAKSGKPNKDDDDCHSATSSATPRLRSSGVGFSFRLEERAEKRKEFFSKLEEKTLAKEAEKTNLQAKSKENQEAEIKLLRKSLTFKATPMPNFYKEPPPKVELKKIPTTRPKSPKLGRHKEPTMNNNSGEDKCCSSPRGKQQQNDSNKGKGHKDVISKKQIPKTHSKLKSEENVTTENKEFQVPDDNNSECKNDMELQCEPGHASNTALLLNSTTKELVSYEVIVGV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02971 415 MobiDBLite consensus disorder prediction 286 307 - -
Vian2g02971 415 MobiDBLite consensus disorder prediction 87 107 - -
Vian2g02971 415 MobiDBLite consensus disorder prediction 308 332 - -
Vian2g02971 415 MobiDBLite consensus disorder prediction 333 377 - -
Vian2g02971 415 MobiDBLite consensus disorder prediction 277 377 - -
Vian2g02971 415 MobiDBLite consensus disorder prediction 45 73 - -
Vian2g02971 415 MobiDBLite consensus disorder prediction 189 215 - -
Vian2g02971 415 MobiDBLite consensus disorder prediction 87 109 - -
Vian2g02971 415 Pfam Targeting protein for Xklp2 (TPX2) domain 220 289 IPR027329 -
Vian2g02971 415 PANTHER PROTEIN WVD2-LIKE 4 44 378 IPR044833 GO:0008017
Vian2g02971 415 MobiDBLite consensus disorder prediction 190 205 - -
Vian2g02971 415 MobiDBLite consensus disorder prediction 35 73 - -
Vian2g02971 415 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02971 Vian-Chr2 50363078 50365241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02971 - - vun:114179125 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02971 2 50363078 50365241 Vian3g02595 3 40351868 40354183 PCT