Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02960 ATGGATTTGGAATCTTCTAGGGATTCGGTGAAATGTTGCAAGCACTGCGAATGTGGGTGTAGTGATTGCTCCATGGTAGCGCAATCTTCAAGGAATTGGTCCCGTTGTGTGAAAAGGAAACACAAGGAGTTGGAACGGGGCGGGAAATTCTCTGTGCCAGGGCCGGATTGCGATCCAGTGGCGCGTGTTGACATTGGAAATGAATGTGAAGCTTTACGGCAGGCTGTTAGCAGCCAACAACAATCAATACAGGATTTGTATGCTGAATTGGAGGAGGAGAGGAGTGCTGCCTCCTCGGCTGCGAATGAGACCATGTCAATGATATTAAGGTTGCAGAGGGAGAAGGCAGAGCTTCAGATGGAAGCGCGACAGTTCAAGAGATATGTGGAGGAGAGAACGGTTTACGATCAGCAGGAGCTTTTGTTGTTGGAGGATATGTTGTATAAGAAGGAACAGGCTATTCACTCGCTCACCTGTGAGGTGCAGGCTTATAAGCACAGGTTGATGAGTTTTGGCCTCACTGAATCCGAGGCAGAAGGTGATCAGGATGAATTTCCCCCTTACGAGTACCCTCCTTTGAGATGTAAGGCAATGCATACTTGTGCTGATACGGACAATGATGACATAGACATTGATAAATATGCTTTTGGCGAAACTCCTAAGGACAGATTGAGGAACTTAGAAAGTAGGATATCTCAAATGGAGAGAAGCCCCACTTATAGCCAGGTGGATGGGGAATTTGGTGCAAAAAATATTTTTGAGAAGGTGATAGTTGGACAGTCTCCAAGATGGACCAAACATTCCAGGAAATTTTCTTGTGACTCATCTTCACTGTGTCCGGAGTATATGGTGGATTCCCCTAGCGTTAGGAAGATGGATTCTCTCTCACAATCGGGTGACCTTCCCAACTTGAAGAAGATGGATAATGTATCCGAAGCTGGTGATGATATGATTGATAAAGTCTATACAATTGACTCCGAGTTCAAAACTGGAGTTAATGTTTGCGATGATTATGCAAGCACTCCAAGGGACTATGTTAATAACGCGGATTTTGAAGATCCATACGTAAAGAAGCTTTACATGAGACTTCAAGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCCATGCGCACTGATAAAGCACAACTTGTTTTACTGAGAGAAATCGCTCAGGAATTGTGCAAAGAGATGTCAGAGAAAAAAAGAATGGCAGCGAGGTCCTTTATTGGCAGCTTCTCATTCTTGACAGTTTTCAAGTGGATTGCATCAATTGTTTTCTGGAGAAAGGAAGCTAATAAAATCAAGTATATGTTCGGACTACCGTCTGACAGCGTAGGCTTGCTAATGCTGCTTGACAAAGGACCCCATGTAAGGTCATGGAGATATATTCAGAGAACACAAGTGGGAGAGTAG 1425 0.4428 MDLESSRDSVKCCKHCECGCSDCSMVAQSSRNWSRCVKRKHKELERGGKFSVPGPDCDPVARVDIGNECEALRQAVSSQQQSIQDLYAELEEERSAASSAANETMSMILRLQREKAELQMEARQFKRYVEERTVYDQQELLLLEDMLYKKEQAIHSLTCEVQAYKHRLMSFGLTESEAEGDQDEFPPYEYPPLRCKAMHTCADTDNDDIDIDKYAFGETPKDRLRNLESRISQMERSPTYSQVDGEFGAKNIFEKVIVGQSPRWTKHSRKFSCDSSSLCPEYMVDSPSVRKMDSLSQSGDLPNLKKMDNVSEAGDDMIDKVYTIDSEFKTGVNVCDDYASTPRDYVNNADFEDPYVKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLREIAQELCKEMSEKKRMAARSFIGSFSFLTVFKWIASIVFWRKEANKIKYMFGLPSDSVGLLMLLDKGPHVRSWRYIQRTQVGE 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02960 474 Coils Coil 356 383 - -
Vian2g02960 474 Pfam Zein-binding 71 161 IPR007656 -
Vian2g02960 474 Coils Coil 69 131 - -
Vian2g02960 474 ProSiteProfiles GTD-binding domain profile. 67 165 IPR007656 -
Vian2g02960 474 PANTHER BNAANNG28530D PROTEIN 66 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02960 Vian-Chr2 50286884 50289104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02960 - - gmx:100797605 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02960 2 50286884 50289104 Vian2g02960 2 50286884 50289104 ECH