Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02958 ATGTCAAATTTCTCGTCATGGTTCTTTCGCTTACGATATTCTTCCTCCAAGCTCTTCCATCGCTACCGCACCCTCCACAATAAATACACACCCACCGTCTTCAACAACTGCTCTGCCAGGAACGCACGCTCAACTTCTCTGCTTCCTTTCGCTCTCGCTCTTTCCGCTGGATCACTCGCTCTTCATCCACACTTCAGTCCTTCCTTCTGCGACTCCGACAGGCAGGCTAGTTTTACTTTTTCATTGGAAAACATATCAGTTGATTATGACGAAAGGTATATCCATGGAAAGCCACAAAACAGCTTTCACAAGGCTGTTAATATCCCAGATGTGATTGTTTATCCGAGATCTGAAGAAGAGGTTCCTATTGTACCATATGGCGGAGCTACATCAATCGAGGGTCACACCTTATCCCCTCATGGAGGGGTTTGCATTGACATGTCATTAATGAAAACTGTGAAAGCATTACATGTTGATGACATGGATGTTGTTGTTGAGCCTGGCATTGGATGGATGGAGCTTAATGAGTACTTGGAACCTTATGGACTATTTTTTCCACTTGATCCAGGTCCTGGTGCTAGCATTGGAGGCATGTGTGCTACACGTTGCTCTGGTTCATTAGCTGTGAGGTATGGAACTATGCGTGATAATGTTATCAGTCTAAAGGTGGTTCTTGCCAATGGAGACATTGTGAAGACTGCATCACGTGCCAGGAAGAGTGCTGCAGGGTATGACTTGACCCGCTTGATGATTGGAAGTGAAGGAACACTTGGTCTTATAACAGAAGTAACCCTGCGGCTTCAGAAAATTCCTCAGCATTCAGTGGTTGCAATGTGCAATTTTCCTTCTGTGAAGGATGCAGCAGATGTTGCTATTGCCACAATGAGGTCTGGTGTACAGGTGTCAAGGGTAGAGCTATTGGATGAAGTTCAAGTGAAAGCTATCAACATTGCTAATGGGAAAAATTTGCCTGAAAGTCCAACTTTAATGTTTGAATTTATAGGAACAGATTTTGTATTTGCAGAAGAACCTGAAGCAAAAAAAGAACTTTGGAAGGTAAGGAAAGAGGCACTCTGGGCTTGCTTTGCAATGGAACCTAATCTGGAGGCAATGATTTCAGATGTATGTGTTCCTTTATCTCACCTTGGTGATTTAATTTCAAGGTCTAAAAAGGAGCTGGATGCATCACCACTAGTTTGCACAGTAATCGCTCATGCCGGTGATGGTAATTTCCACACGGTTATTCTATTTGATCCTAGCCAAGAAGAACATCGACGGGAGGCAGAGAGACTCAACCAATTTATGGTTCATGCTGCCTTGTCATTGGAAGGAACTTGTACTGGTGAACACGGTGTTGGCACTGGAAAAATGAAGTATCTTGAAGAAGAACTCGGAGTGGAAGCATTGAGGACAATGAAAAAAATAAAATCAGTCCTAGATCCCAACAATATCATGAATCCAGGAAAGCTAATTCCTCCCCATGTTTGTTTCTAG 1494 0.4331 MSNFSSWFFRLRYSSSKLFHRYRTLHNKYTPTVFNNCSARNARSTSLLPFALALSAGSLALHPHFSPSFCDSDRQASFTFSLENISVDYDERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVPIVPYGGATSIEGHTLSPHGGVCIDMSLMKTVKALHVDDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGLITEVTLRLQKIPQHSVVAMCNFPSVKDAADVAIATMRSGVQVSRVELLDEVQVKAINIANGKNLPESPTLMFEFIGTDFVFAEEPEAKKELWKVRKEALWACFAMEPNLEAMISDVCVPLSHLGDLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPSQEEHRREAERLNQFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKSVLDPNNIMNPGKLIPPHVCF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02958 497 Gene3D - 74 290 IPR016169 -
Vian2g02958 497 Pfam FAD linked oxidases, C-terminal domain 332 490 IPR004113 GO:0003824|GO:0050660
Vian2g02958 497 FunFam D-lactate dehydrogenase mitochondrial 369 450 - -
Vian2g02958 497 SUPERFAMILY FAD-linked oxidases, C-terminal domain 275 493 IPR016164 GO:0003824|GO:0050660
Vian2g02958 497 ProSiteProfiles PCMH-type FAD-binding domain profile. 94 270 IPR016166 GO:0071949
Vian2g02958 497 Gene3D - 451 491 IPR016171 -
Vian2g02958 497 FunFam D-lactate dehydrogenase mitochondrial 451 491 - -
Vian2g02958 497 FunFam D-lactate dehydrogenase [cytochrome], mitochondrial 75 290 - -
Vian2g02958 497 Gene3D - 369 450 - -
Vian2g02958 497 Pfam FAD binding domain 118 233 IPR006094 GO:0050660
Vian2g02958 497 PANTHER D-LACTATE DEHYDROGENASE 82 493 - -
Vian2g02958 497 SUPERFAMILY FAD-binding/transporter-associated domain-like 83 271 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02958 Vian-Chr2 50258240 50268029 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02958 K00102 - gmx:100803612 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02958 2 50258240 50268029 Vian2g02958 2 50258240 50268029 ECH