Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02953 ATGGAACGTCAGGGTCATGATTATACAGCTGCATCTGCTATGGCATATGCTCAGCAACAGAGGCAAGCTGCTAATATGCAGCAGCAGCAACAACAACAGCAACAGTTTGGGTTTCATCCCCAGCATCAGCAGTTTCCTTCATCAATGCACGGTCCTCCTTTTATACCCCCAGGTCCAGGTCCTGCGCACCCCCCTATGCAACAATTCCCGTATCATCATGCCTTGCAGCAGCAGCAGCCACTTCCACAATTACACCCTCATGCCCCTCCCCCGCCCCATCTCCTTCTTCAGCAGCAGCACCAAGGACCACCTGCATTCCCTTCACATTATCCTCCTTCTCTTGTTCCATCACCTTTTTATGATTCTGCCCCACTCCCTGTCGCCCCCCCTTCTGATCCGGATCTCCACAAGCGAATTGACAAGCTTGTTGAGTATGCAGTGAAAAACGGCCCCGACTTTGAGGCTATGATATGTGAAAAGCAACGTGATAATCCTTCATATAGTTTCCTCTTTGGCGGGGAAGGCCACAGTTACTACCGTTATAAGCTTTGGTTGTCAACTCGTCCACCGGGTGGTCCATTCAACCCGCCTTTCCCGTCATCTTCCATGCCCATGATCCATCCCCCTCCAAATCCAATGATGAATCCGTCTCCTCTAAATGCTTCTCCAATGAATCCTGCAGGAATTGGGTCTTCACCTTCAATGCTAGGCCCACCTCCTTTCCAACAGTTCTATGATCAACAACACCACCATCAGCATCCTCAATCTTTTGGGCTTCCTGTGCGGCCTGAGTATGATCAGTCATCCAATTCTTTCAAAGGACCCTCTGGGCCACTTCCATCTGATGTCGCAATGGAGCTCAGTAACGTTCTTAACAATTTAAATGGTACAAAAGAATCCATCAAAGGTGCAAAACTTTGGTTCATGCAGAGATCTCCATTTGCACCAGCCCTAGCAGAGGCTCTTAGAGACAGGGTCTTTGCATTGGATGAAGTCGAGAGACAGTTACACATAATATACCTTGCCAATGACATCCTTTTTGACAGCTTAAATAGGAGAACAAACGGCAATGACCTTGACAGTGAAGCTCTTGCCTTGAAACCAGTTTTAGGCTCCATGCTTGCAAGAATTTATCATAACCCACAAAGCAATGAGGAATACAGGAAAAGATTGCAGCAGATGGTGGAATTCTGGGCCTCTAAAACGGTATACGATCAGGATACTATATCTTCACTTAAGGGTGAGATGATTGGTGGGCTGCAAACAAATCCTTTTCCTGGGGCTTCAAAGGATTTATCTTCTGCTTCAGCAGAATCAGTTGCAGGAGTTTTGCAGACACCTAACCATGTTGCCCAGCAGTGGCAAGCTGATAGGTTAGGCTCTGGTTCAAATGTCTTAGATCAAGATCGTACTGATAAGCATGCAACTCCAGCACAGTCACTATCTGTATCCCTAGCAGCTCAGCAGTTTCTTCCAAATCCTGCTCCTCCTAGTGCCTTTCCTGGGTCCATGGCTATTCCATCTTCTGTTCAACCCGCTAACCAAGCACCTGGTGGTGTTCATTTATTGCCCCCTCCATCATCCAGCACCGGTGAACAATTGCCACCATATCCATTATTTCCACCTGGCCTCATTCCTGGAATGGTTAGAAAGATGCAGATCGGTAGTGGGGTTCCATATTCTCCTTTGAGCCCTTTGGATATCCCAACCATCATACCGCCGTCAACTGTGCCACCATCTGAAATTCTTCAAAGAGTGTCAAAATTCTTTAAGGAAATTGGAGAGGTAAATCCTTCTGAGGGTCCTATGAATTCTGATTCAAGAGATGAAGATGATGAATATGATAGAGAATTTGAGAGGGAGCCAGCAGTACGAAAGGGAGGTGCTTGTATACCTCCACCTCCAAACTTGCAGGTTGATCCAGAGACAGGGACCTATGCTGATGGGACAGTAGAACGGAAACCTGGATCCAGTGGCTCGGGCAGGTTAGGGCTGGGGGCCACTGCTAATCCCAACGAGGTGAGTCAGTATGATGATGTATATACATCTTACAGGAAGCAGAGAAGCACCAATTACCATTCATCAATGAGTGCTAGAGCTGCAGCAAGATGA 2112 0.473 MERQGHDYTAASAMAYAQQQRQAANMQQQQQQQQQFGFHPQHQQFPSSMHGPPFIPPGPGPAHPPMQQFPYHHALQQQQPLPQLHPHAPPPPHLLLQQQHQGPPAFPSHYPPSLVPSPFYDSAPLPVAPPSDPDLHKRIDKLVEYAVKNGPDFEAMICEKQRDNPSYSFLFGGEGHSYYRYKLWLSTRPPGGPFNPPFPSSSMPMIHPPPNPMMNPSPLNASPMNPAGIGSSPSMLGPPPFQQFYDQQHHHQHPQSFGLPVRPEYDQSSNSFKGPSGPLPSDVAMELSNVLNNLNGTKESIKGAKLWFMQRSPFAPALAEALRDRVFALDEVERQLHIIYLANDILFDSLNRRTNGNDLDSEALALKPVLGSMLARIYHNPQSNEEYRKRLQQMVEFWASKTVYDQDTISSLKGEMIGGLQTNPFPGASKDLSSASAESVAGVLQTPNHVAQQWQADRLGSGSNVLDQDRTDKHATPAQSLSVSLAAQQFLPNPAPPSAFPGSMAIPSSVQPANQAPGGVHLLPPPSSSTGEQLPPYPLFPPGLIPGMVRKMQIGSGVPYSPLSPLDIPTIIPPSTVPPSEILQRVSKFFKEIGEVNPSEGPMNSDSRDEDDEYDREFEREPAVRKGGACIPPPPNLQVDPETGTYADGTVERKPGSSGSGRLGLGATANPNEVSQYDDVYTSYRKQRSTNYHSSMSARAAAR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02953 703 Gene3D - 284 419 IPR008942 -
Vian2g02953 703 MobiDBLite consensus disorder prediction 262 276 - -
Vian2g02953 703 MobiDBLite consensus disorder prediction 50 66 - -
Vian2g02953 703 MobiDBLite consensus disorder prediction 594 703 - -
Vian2g02953 703 MobiDBLite consensus disorder prediction 248 276 - -
Vian2g02953 703 Gene3D Surp module 123 188 IPR035967 GO:0003723|GO:0006396
Vian2g02953 703 Pfam Surp module 139 184 IPR000061 GO:0003723|GO:0006396
Vian2g02953 703 Pfam CID domain 286 412 IPR006569 -
Vian2g02953 703 MobiDBLite consensus disorder prediction 81 113 - -
Vian2g02953 703 MobiDBLite consensus disorder prediction 663 697 - -
Vian2g02953 703 MobiDBLite consensus disorder prediction 1 68 - -
Vian2g02953 703 MobiDBLite consensus disorder prediction 13 48 - -
Vian2g02953 703 SMART surpneu2 136 188 IPR000061 GO:0003723|GO:0006396
Vian2g02953 703 MobiDBLite consensus disorder prediction 83 97 - -
Vian2g02953 703 SMART 558neu5 286 417 IPR006569 -
Vian2g02953 703 SUPERFAMILY Surp module (SWAP domain) 110 185 IPR035967 GO:0003723|GO:0006396
Vian2g02953 703 ProSiteProfiles CID domain profile. 279 420 IPR006569 -
Vian2g02953 703 ProSiteProfiles SURP motif repeat profile. 138 182 IPR000061 GO:0003723|GO:0006396
Vian2g02953 703 PANTHER SR-RELATED CTD ASSOCIATED FACTOR 6 125 702 IPR039037 GO:0006874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02953 - - gmx:100816468 1053.51