Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02946 ATGGCGGTTTCCGAAGAGGAATGCTCTTCAGCGAAGTCTGGTCCTTCTTCTTCTTCCTCCGCCTCGCGCTACTACCTCTCCAAATGCGTCCTCAGAGGAAGCGTCGTTCTTCAGGTCCTCTACGCTCACATTCGTTCTCCCTCCTCTAATGACATCATTTTTGGCAAGGAGACGTCTATTGAATTGGTGGTTATTGAGGATGATGGGAATGTGCAATCTGTGTGTGATCAGCCCGTCTTTGGCACCATCAAAGATCTTGCCATATTGCCTTGGAACGAGAAGTTTCGTGCACGTGATCCTCAGCTGTGGGGTAAAGACCTTTTGGTTGCTACATCCGATTCTGGGAAGCTGTCGTTGCTCACGTTTTGCAATGAAATGCACAGGTTTGTTTCTGTAACACATATACAGATGTCTATTCCTGGAAACCCATTGGATCTTCCTGGAAGAAGGTTAGCCGTTGATTCCAGTGGTTGTTTTATTGCTTCTAGTGCATACGAAGATCGGCTGGTTATGTTTTCTATGTCGATGTCCAGTGGTGATATCATTGATGAGAGAATTCTATATCCTTCGGAAAGTGAAGGAACTGCAAGCTCTTCCAGAAGCATCCAAAGAACCAGTATGCGTGGTACCATTTGGAGCATCTGCTTCATTTCACAAGATTCCAGACAACCAAGCAAGGAGCATAATCCTGTACTTGCTGTTATTATAAATAGGAGGGGAGCCCTTCAAAATGAATTGCTATTATTGGAATGGAATGTTGAAGCACACAAAATATTTGTTATTTCTCAGTATGCTGAAGCTGGGCCTCTGGCATATGACATTGCTGAAGTTCCTAACTCCGGGGGACTTGCATTCCTGTTCAGGACTGGTGATGTTCTCTTAATGGATCTTAGAGATCCCCGCAACCCATTCTGTGTCTATAAGACTAACTTGAACATTTTGCCAAATGCCATGGAAGAGCAGACTTATGTGGATGACTCTTGTAAATTACACGATGTTGACGATGAACGCTTTAATGTTGCTGCCTGTGCTTTGTTGGAACTGAGCGATTATGATCCTATGTCCATAGACAGTGACAGTGGTGGTGCTAATTCAGGCTACAAATACATATGCTCATGGAGTTGGGCACCTGAAAATAATAGAGATCCTAGGATGATCTTCTGTGTAGATACTGGGGAATTTTTTATGATTGAAGTTCTTTTTGATTCTGAAGGCCCTAAAGTTAATCTGTCTGAGTGTCTCTATAAAGGTCTGCCGTGTAAAGCACTTTTGTGGGTTGAAGGTGGATATGTAGCTGCCCTTGTGGAAATGGGGGATGGTGTGGTTCTGAAATTGGAAGATGGAAGGCTATGCTATACAAACCCTATTCAAAACATTGCACCAATCTTGGATATGGCAGTTGTAGATTATCGTGATGAGAAGCATGATCAAATGTTTGCTTGCTGTGGTGTGGCTCCAGAGGGGTCATTAAGGATAATTCGAAATGGTATTAATGTGGAAAATCTACACAGGACTGCTTCTATATATCAAGGGGTAACTGGTACTTGGACTGTCAGAATGAAAATTACTGATTCACATCATTCTTTTCTAGTTCTATCGTTTGTTGAGGAAACCAGAATATTGTCAGTTGGGTTAAGTTTTACTGATGTGACTGATTCAGTTGGTTTCGAACCTAATGTCTGTACTCTGGCATGTGGCCTTGTGACTGATGGTGTACTTGTTCAGATCCACCACTGTACTGTTAAGCTTTGTTTGCCCACTAAAGCTGCTCATTCTGAAGGTATCCCTTTGCCCTCTCCTATTTCCACATCTTGGTCTCCAGACAATGTGAGTATCAGTTTGGGGGCAGTTGGGCATAATTTCATAGTTGTGTCAACCTCTAACCCATGCTTTTTGTTTATCCTTGGGGTTAGATTGCTATCAGCTTATCAATATGAAATTTATGAAATGCAACATTTGGTACTGCAGAATGAATTATCATGCATTTCCATCCCTGGACAAGAAATTGAGCAAAAACCATCAAATTCATCCATTTCAGCAAATAATAGTAACATCTCTTCTTTCCAAAGTGGAGTGGACATCAGTAAAACCTTTGTTATTGGTACACACAGGCCCTCTGTGGAAATTTGGTTTTTCGCACCAGGTGGAGGAATTACAGTAGTGGCTTGTGGGACAATTTCATTGACTAATACAATAGGTACTGCCATCAGTGGTTGTGTACCTCAAGATGTACGACTTGTATTTGTTGATAAGTATTATGTTCTTGCTGGATTGAGGAATGGAATGCTTCTCCGCTTTGAGTGGCCGGTGGAACCATGTCCATCATCACCAATAAATATGGTGGATACTGCTTTATCTTCTATAAATTTGGTAAATTCTGCAAGCAATGTTTTAGGCAAGAGAAACGACCCTCCTTCAACACTTCAATTGATTGCCATTCGACGCATTGGCATTACTCCAGTTTTCTTGGTGCCACTAGGTGACACACTGGATGCTGATATAATTGCTCTTAGTGATAGGCCTTGGTTGTTGCATAGTGCAAGACATAGCCTTTCGTATACTTCTATCTCATTTCAACCTTCCACACATGTGACTCCTGTTTGCTCTGTTGAGTGTCCAAAAGGAATATTGTTTGTTGCAGAAAACTGTTTACATCTGGTGGAGATGGTTCACAGCAAGAGACTTAATATGCAGAAGTTTCATTTAGAGGGCACTCCTAGGAAGGTCCTGTATCACGATGAAAGCAAAATGTTGCTAGTAATGAGGACTGACCTGAATTGTGGTACATGTCTGTCTGACATATGTTGTGTGGATCCCCTAAGTGGATCAGTAGTGTCGACTTTTAGACTTGAACTTGGTGAAACAGGAAAGTGCATGGAATTAATAAGAGTTGGAAGTGAGCAAGTGCTTGTTGTTGGAACTAGTCTGTCTTCTGGTCCAGCCATAATGCCCAGTGGTGAAGCTGAAAGAGATTTAAACAGTTGCAAGGGTCGTCTTCTTGTTCTTTGTCTTGTTCATGTGCAAAATTCAGATAGTGGTTCGATGACATTCTGTTCAAAGGGAGGGTCATCATCTCAAAAAACTTCGCCATTCCATGAAATTGTTTCATATGCTCCTGAACAGTTATCAAGCAGCAGCCTGGGCAGCAGTCCTGATGATAATAGTTCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTCCGATTGGCTTATGCAACAAAATGGCAGGGGGTGGTTTTTAAAATCTGTCCTTATCTTGATCGTTACTTCTTGGCATCTGCTGGCAATGCTTTCTATGTTTGTGGTTTCCCTAATGACAATCCTCAAAGAGTGAGAAGGTATGCTATGGGAAGGACGCACCACATGATAACATCTTTGAGTGCACATTTTACAAGAATTGCAGTTGGGGATTGTCGTGATGGAATCATTTTATTTTCTTATCATGAGGAAGCTAGAAAATTGGAGCAACTTTGCTGTGATCCATCACGAAGGTTAGTTGCTGATTGCATTTTGATGGATGCTGATACAGCTGTTGTTTCGGATCGAAAAGGAGGCATTGCTATTTTATGTTCAAATCATTTGGAAGATAATGCAAGTACTGAATGCAACATGACACTAAGCTGTGCTTATTTCATGGCTGAGATTGCCTTGAGCGTCCAGAAGGGCTCATATTCATACAGACTTCCAGCTGATGATGTTTTGCAAGGCGGCAATGGCCCCAAGACAAATGTTGATTCACTACAAAATACTATTATTGCCAGTACCCTGTTAGGAAGCATAATGATCTTCATCCCTTTATCAAGGGAAGAATATGAGTTATTAGAAGCTGTGCAAGAAAGACTCGTTGTCCACCAGTTGACCGCACCTGTTCTAGGAAATGATCATAACGAGTTTCGCCGTCGTGAAATCCGAGGTGGAGTACCCAAGATACTTGATGGTGACGTGTTAACCCAGTTTCTGGAGCTGACAAGTATGCAGCAAAAGATGATTTTGTCTTCCGAGCCACCTGATATAGCAAAACCAAGTTTGAAGCCACTCCTACCCCCCAATGTTTCTGTAAATCAGGTGGTTCAACTTCTTGAACGAGTTCATTATGCTCTGAACTAA 4113 0.4192 MAVSEEECSSAKSGPSSSSSASRYYLSKCVLRGSVVLQVLYAHIRSPSSNDIIFGKETSIELVVIEDDGNVQSVCDQPVFGTIKDLAILPWNEKFRARDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFVSVTHIQMSIPGNPLDLPGRRLAVDSSGCFIASSAYEDRLVMFSMSMSSGDIIDERILYPSESEGTASSSRSIQRTSMRGTIWSICFISQDSRQPSKEHNPVLAVIINRRGALQNELLLLEWNVEAHKIFVISQYAEAGPLAYDIAEVPNSGGLAFLFRTGDVLLMDLRDPRNPFCVYKTNLNILPNAMEEQTYVDDSCKLHDVDDERFNVAACALLELSDYDPMSIDSDSGGANSGYKYICSWSWAPENNRDPRMIFCVDTGEFFMIEVLFDSEGPKVNLSECLYKGLPCKALLWVEGGYVAALVEMGDGVVLKLEDGRLCYTNPIQNIAPILDMAVVDYRDEKHDQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVTGTWTVRMKITDSHHSFLVLSFVEETRILSVGLSFTDVTDSVGFEPNVCTLACGLVTDGVLVQIHHCTVKLCLPTKAAHSEGIPLPSPISTSWSPDNVSISLGAVGHNFIVVSTSNPCFLFILGVRLLSAYQYEIYEMQHLVLQNELSCISIPGQEIEQKPSNSSISANNSNISSFQSGVDISKTFVIGTHRPSVEIWFFAPGGGITVVACGTISLTNTIGTAISGCVPQDVRLVFVDKYYVLAGLRNGMLLRFEWPVEPCPSSPINMVDTALSSINLVNSASNVLGKRNDPPSTLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSVECPKGILFVAENCLHLVEMVHSKRLNMQKFHLEGTPRKVLYHDESKMLLVMRTDLNCGTCLSDICCVDPLSGSVVSTFRLELGETGKCMELIRVGSEQVLVVGTSLSSGPAIMPSGEAERDLNSCKGRLLVLCLVHVQNSDSGSMTFCSKGGSSSQKTSPFHEIVSYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLAYATKWQGVVFKICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRYAMGRTHHMITSLSAHFTRIAVGDCRDGIILFSYHEEARKLEQLCCDPSRRLVADCILMDADTAVVSDRKGGIAILCSNHLEDNASTECNMTLSCAYFMAEIALSVQKGSYSYRLPADDVLQGGNGPKTNVDSLQNTIIASTLLGSIMIFIPLSREEYELLEAVQERLVVHQLTAPVLGNDHNEFRRREIRGGVPKILDGDVLTQFLELTSMQQKMILSSEPPDIAKPSLKPLLPPNVSVNQVVQLLERVHYALN 1370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02946 1370 MobiDBLite consensus disorder prediction 1 21 - -
Vian2g02946 1370 Gene3D - 35 457 IPR015943 GO:0005515
Vian2g02946 1370 FunFam Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 497 894 - -
Vian2g02946 1370 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 29 1335 - -
Vian2g02946 1370 Gene3D - 497 894 IPR015943 GO:0005515
Vian2g02946 1370 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 106 664 IPR018846 -
Vian2g02946 1370 Pfam CPSF A subunit region 1068 1323 IPR004871 GO:0003676|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02946 Vian-Chr2 50137136 50152219 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02946 K12830 - gmx:100806799 2402.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02946 2 50137136 50152219 Vian2g02946 2 50137136 50152219 ECH