Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02936 ATGATGCTCAGACTTCGAAGCCGCGACGGCCTGGAGCGAGTAATCGTCGAAAACCCGCACACCACCACAGTGTCGGAGCTGAAACGGATTATCGAAGCCCAATTGAGAATTCCGGTTCACAACCAAACCCTCTCCACCAACCAGAACCTTCTATTGGTGAAATCGCGTGAAGATCTCCATCGATTCACCGATATGGCCAATCCCGACCTCACTCTCTCGTCTCTCAACCTCGCCCACGGCTCAATCGTCTTTTTGACATACGAAGGCGAGCGCCACGTGGCGGGCCCTGCCTTCAACCCAGCGGGGTCCTTCGGCCGCAAGATGACCATGGATGACCTCATCGCCAAGCAGATGCGCGTCACGCGCCAGGAGAATCCGCACTGCGAGCTCGTCTCCTTCGACCGCGACTGCGCCAACGCGTTCCAGCATTACGTGAACGACACGCTGGCGTTCGCGGTCAAGCGCGGCGGCTTCATGTACGGCACTGTTTCCGAGGAGGGGAAGGTCGAGGTGGACTTTATCTACGAGCCGCCGCAGCAGGGTTCGGAAGAGAATCTCTTGTTTTTCAGAGACCCCGAAGAGGAGAAACTCGTGGAGGCTATTGCGGCGGGGTTGGGGATGAGAAGGGTAGGGTTCATTTTCACGCAGACGATAAGCCAGGACAAGAAGGACTATACTTTGTCGAATAGGGAGGTGCTTCAGGCTGCGGAGTACCATGCTGAGAGTGGATTGAAAGAGTGGGTTACTGCGGTTGTTAAACTTGAGGTGAATGATGATATGAGTGCGGATGTGCATTTTGAAGCGTTTCAGATTAGTGATGTGTGCGTGAGATTGTTCAAGGAAGGGTGGTTTGAGACTGAGATAAAGGAGGACGATGATCCCAAGTTATCTAAGATGAAGAAGGATGTCGTTGTTGGGGTTAAGGATACCAAAGAAGTTGACAATGATTTCTTCTTGGTCGTCGTCAAAATCTCAGATCATCAGGGTCCTCTTTCATCTTCGTTTCCCGTTGAGAACCGGAACACTCAGATGACTATGAAGGCTTTGAAGAATCATCTGGACAGGACAAAAAGTCTTCCATTTGTGAAGCGAATTTCTGATTTTCACCTTCTTCTTGTACTGGCAAGGGTTTTAGACTTGAATGCTGATGTCCCTGCATTGACGGCATGTGTGCACACACAGACTTCTATACCAGAAGGTTACCAGATCCTTATTGAGTCTATGGCAAATACCGCGTGA 1239 0.5101 MMLRLRSRDGLERVIVENPHTTTVSELKRIIEAQLRIPVHNQTLSTNQNLLLVKSREDLHRFTDMANPDLTLSSLNLAHGSIVFLTYEGERHVAGPAFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCELVSFDRDCANAFQHYVNDTLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGSEENLLFFRDPEEEKLVEAIAAGLGMRRVGFIFTQTISQDKKDYTLSNREVLQAAEYHAESGLKEWVTAVVKLEVNDDMSADVHFEAFQISDVCVRLFKEGWFETEIKEDDDPKLSKMKKDVVVGVKDTKEVDNDFFLVVVKISDHQGPLSSSFPVENRNTQMTMKALKNHLDRTKSLPFVKRISDFHLLLVLARVLDLNADVPALTACVHTQTSIPEGYQILIESMANTA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02936 412 Pfam NPL4 family 157 283 IPR007717 -
Vian2g02936 412 Gene3D - 1 101 - -
Vian2g02936 412 FunFam NPL4-like protein 1 1 100 - -
Vian2g02936 412 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 1 89 IPR016563 GO:0006511
Vian2g02936 412 CDD Ubl_AtNPL4_like 1 86 - -
Vian2g02936 412 Pfam Nuclear pore localisation protein NPL4 1 86 IPR024682 -
Vian2g02936 412 ProSiteProfiles MPN domain profile. 130 271 IPR037518 -
Vian2g02936 412 SUPERFAMILY Ubiquitin-like 1 90 IPR029071 -
Vian2g02936 412 CDD MPN_NPL4 119 374 IPR007717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02936 K14015 - gmx:100811623 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02936 2 50055990 50059108 Vian2g02936 2 50055990 50059108 ECH