Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02927 ATGCAGAGAGAGAAGGTGATAATAGTCGGAGGCGGAACTTCCGGCATGGCCGCAGCATCATGCTTAACGAAGCAATCAATACCTTACATCATCCTCGAAAGAGAAGATTGTTCGGCTTCCATGTGGAAAAAGTACACGTACGATCGTCTCCATCTCCATTTGGTCAAGCGAGTGTGCGAGTTACCGTTCTTTCCGTTTCCCAACTCTTACCCTAACTACGTGCCTCGGAAGCTGTTCGTCGAATACTTGGAAACCTACGAGAAGCATTTCGACATGAAGATTTTGTATCACCGCTGCGTGGTGCTGGCGGAGTATGACGAAGCGGAACAGATCTGGAGAGTGAAGGCTCAGAACAGAAGTACTGGTGAAGTGGAGGAGTACGGTGGAAGGTTTTTGGTGGTGGCAAGTGGCGAAGATAAGCCTCACGTGCCTAGGGTTGAAGGGTTGGAGAGTTTCAGAGGAAGAGCGATTCATTCAACTTCGTACAGAAACGGGAAGGAGTACAGAGATGAACATGTTCTGGTTGTTGGATCTGGGAATTCTGGCATGGAGATTGCGCTTGATTTGGCCAATTTTGGTGCTAAGCCTTCCATCGTTGCTCGCACTCCGGAACAGGTTCATTTTCTTTCGAGGAATATGATGAATTATGGGTCGCTTTTGTTATGGTATTTGTCAACAGAAACAGTGGAGAAACTGTTGGCGATAGTTAGCAGGATTGTGTATGGTGATCTGAGTAAGTATGGGCTGCCGTTTCCCAGTGAAGGTCCTTTCACCATGAAGAGAAAGTACGGTAAGTTCCCGGTCATTGATTTGGGAACAATCAAGAAAATCAAATCTGGAGAGATACAGGTGGTGCCCACAGAAATAGAGAGTATAAGAGGGAACGAAGTGTTGTTTCGAGGTGGCAAATCGTTCCCCTTTGATTCAATTATTTTCTGCACAGGCTTCAAGAGAACCACTCAAAAGTGGCTCAAGGGAGGTGAAGATCTTCTGAACGAGGATGGTTTTCCTTGTTCGCAAAATCAATGGAAGGGTAAGAACGGTTTGTACTGCGTTGGAATGGGAAGAGCAGGATTCTATGGAGCCAATGCTCAGGCTCAAAACATAGCAAATGATATTGTCTCCTTAGATCCATAA 1137 0.4609 MQREKVIIVGGGTSGMAAASCLTKQSIPYIILEREDCSASMWKKYTYDRLHLHLVKRVCELPFFPFPNSYPNYVPRKLFVEYLETYEKHFDMKILYHRCVVLAEYDEAEQIWRVKAQNRSTGEVEEYGGRFLVVASGEDKPHVPRVEGLESFRGRAIHSTSYRNGKEYRDEHVLVVGSGNSGMEIALDLANFGAKPSIVARTPEQVHFLSRNMMNYGSLLLWYLSTETVEKLLAIVSRIVYGDLSKYGLPFPSEGPFTMKRKYGKFPVIDLGTIKKIKSGEIQVVPTEIESIRGNEVLFRGGKSFPFDSIIFCTGFKRTTQKWLKGGEDLLNEDGFPCSQNQWKGKNGLYCVGMGRAGFYGANAQAQNIANDIVSLDP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02927 378 PRINTS Pyridine nucleotide disulphide reductase class-II signature 168 192 - -
Vian2g02927 378 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Vian2g02927 378 PIRSF FMO 2 324 IPR000960 GO:0050660|GO:0050661
Vian2g02927 378 Pfam Flavin-binding monooxygenase-like 4 317 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vian2g02927 378 SUPERFAMILY FAD/NAD(P)-binding domain 2 249 IPR036188 -
Vian2g02927 378 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 375 - -
Vian2g02927 378 SUPERFAMILY FAD/NAD(P)-binding domain 170 373 IPR036188 -
Vian2g02927 378 Gene3D - 1 377 IPR036188 -
Vian2g02927 378 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Vian2g02927 378 PRINTS FAD-dependent pyridine nucleotide reductase signature 129 147 - -
Vian2g02927 378 PRINTS FAD-dependent pyridine nucleotide reductase signature 172 190 - -
Vian2g02927 378 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02927 Vian-Chr2 49961829 49963685 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02927 K11816 - gmx:100777958 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02927 2 49961829 49963685 Vian2g02927 2 49961829 49963685 ECH