Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02921 ATGGTTAGCATCAAGTTAAAGAAAAAGGGAGAGCCAGTACCAGCTGCTTTCAATGCATCTCCAACCTCCCCACCTTTCTCATTCATACATCCACCACCAGATCCAGCTATGAGCAGCCACACCAAGACCAACCTCGATGGAGTGCACTCTGATGTCAAGGTGGTCGAAAGGCCAACCAAAGAAAGATCCCACGATCTGTTCCTGCGCTTTCTTGGCCTCTCACTCACTCTTGTTGCAACCATCCTTGTTGGTGTAGACAATCAGACCAAAGTCATCTCCTACGCTGAAATGAAATTCAGAGCCACTGCTAAGTGGGAATATATATCTGCTATGGTGTTTTTTGTGGTGTCAAACGCAATAGCATGCTCATATGCAGCTGCATCATTGGTGATAACAGTGATGGCAAGAAGCAGTGGAACAAAAAAAAGCGATTTGACAGATTTGGTGATAACAGCTTTAGACCTTGTGTTGATGGCACTTTTGTTCTCAGCCAATGGTGCAGCTTGTGCAGTGGGAATCATAGCGCAGAAGGGTAACAAGCACTTGCAATGGATGAAAGTGTGCGATGTCTTTGATGCTTATTGTCGCCACATGACAGCTGCATTGGTCCTCTCCATTATTGGGTCCACCGTGTTTCTCTTACTGGTGCTGCATTCTGTTCTCAAACTCCATTACAGATCAAGAAGCTAG 690 0.4565 MVSIKLKKKGEPVPAAFNASPTSPPFSFIHPPPDPAMSSHTKTNLDGVHSDVKVVERPTKERSHDLFLRFLGLSLTLVATILVGVDNQTKVISYAEMKFRATAKWEYISAMVFFVVSNAIACSYAAASLVITVMARSSGTKKSDLTDLVITALDLVLMALLFSANGAACAVGIIAQKGNKHLQWMKVCDVFDAYCRHMTAALVLSIIGSTVFLLLVLHSVLKLHYRSRS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02921 229 PANTHER CASP-LIKE PROTEIN 1U1 58 224 IPR044173 -
Vian2g02921 229 Pfam Casparian strip membrane protein domain 61 209 IPR006702 -
Vian2g02921 229 NCBIfam plant integral membrane protein TIGR01569 66 222 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02921 Vian-Chr2 49913750 49914983 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02921 - - gmx:100817307 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02921 2 49913750 49914983 Vian2g02921 2 49913750 49914983 ECH