Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02919 ATGGCTGAAGGGGAAAATATTGAGCTTAAATTTCGCATATATGATGGAACTGATATAGCACAAAATTTCTATTCATCATCAACAACCATTGCTACCCTCAAGCAAAAGCTAATTGCTGAGTGGCCTCAAGGTAAAACAATTACACCAAAGGTAGTAAGTGACCTAAAACTCATACATGCCGGTAAAATTTTGGAAAACAACAAAACTCTGGCTGATTCCAGAATAACATTCAGTGACATCCCTGGAGGTTTTGTTAACATGCATGTTGTAGTACAACCTCGAACGACTAAAAAGAAAACAGAAAAGAACCATGAGGAGAAACAAAAGACAAATTCATGTTCATGCACTATTGTTTAG 357 0.3641 MAEGENIELKFRIYDGTDIAQNFYSSSTTIATLKQKLIAEWPQGKTITPKVVSDLKLIHAGKILENNKTLADSRITFSDIPGGFVNMHVVVQPRTTKKKTEKNHEEKQKTNSCSCTIV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02919 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 5 116 IPR039540 -
Vian2g02919 118 SUPERFAMILY Ubiquitin-like 3 97 IPR029071 -
Vian2g02919 118 MobiDBLite consensus disorder prediction 95 109 - -
Vian2g02919 118 PIRSF MUB 1 118 IPR017000 -
Vian2g02919 118 CDD Ubl_MUBs_plant 7 94 - -
Vian2g02919 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Vian2g02919 118 MobiDBLite consensus disorder prediction 95 118 - -
Vian2g02919 118 Gene3D - 1 100 - -
Vian2g02919 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 117 IPR040015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02919 Vian-Chr2 49895707 49896254 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02919 - - gmx:100818909 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02919 2 49895707 49896254 Vian2g02919 2 49895707 49896254 ECH