Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02917 ATGGAGGATACCCAAGAAATTAAGGAGCAGGCTCATGAAGAAGTGATTTCAGACAAAACATCTGAGACGAAGCCGGAGACTCGTGATGAAATTCTCTCCCGTCATAGGAAAGAGATATCACAGCTGCAGAAAAAGGAAGTTGAGATGAAAAAGGCTGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTACTAAGCTGAAGGAGAATCATGCCATGGAATTGGCTGCATTAGGCTATAGCAGCGGTAATGGGAATGAAAACAGCAATTTGGACACTTTGGTTAAGGCCATTGCTGGAGTATCTGTTGCTAGTCAACCTGAACATACAAAAGTCAGCAAGGCCAAACAGAGGCGAGACAAAAGAGCTCAACAAGAAGCAGAAAGGGAACAGAGAATCCAAGCAGAGCAGACTGACATTGTAAGCGATCGAATGATTGAAAACGAGAAGTTGGAAAGGAAGTTGAAGCCTCTAGGTTTGACTGTTTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAAGATCAGCTGGCTGTCCTCTCTGGTGGTACATCACTTTATACATACCAAGAACTTCGGGAAATGGTGGCTGCTTACATGAGAAAGCATACATCTGATTTCCTTCCATTTTTCCTGTCAGAGAATTTAATTGAGGATGATTCTAATGAATCACTTGCTGAGAAGTTTGAAAATTACTGTAAAGAAGTGGAGTCCACAGCTATATGGGGAGGGCAACTAGAGCTTGGTGCCTTGACTCACTGCTTGAAGAAGCATATTATGATATTTTCAGGATCCTTCCCCGATGTGGAGATGGGCAAAGAGTATAAATCTGATGGTGGCACTGGCTTGTCTAATTCGAGTATCATGCTTTCTTATCATAAGCATGCTTTTGGGCTAGGAGAGCATTATAATTCTGTGGTCCCAACATGA 975 0.4308 MEDTQEIKEQAHEEVISDKTSETKPETRDEILSRHRKEISQLQKKEVEMKKAAARGSKAEQKAKKKQVEEEVSQLSTKLKENHAMELAALGYSSGNGNENSNLDTLVKAIAGVSVASQPEHTKVSKAKQRRDKRAQQEAEREQRIQAEQTDIVSDRMIENEKLERKLKPLGLTVCEIKPDGHCLYRAVEDQLAVLSGGTSLYTYQELREMVAAYMRKHTSDFLPFFLSENLIEDDSNESLAEKFENYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDGGTGLSNSSIMLSYHKHAFGLGEHYNSVVPT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02917 324 PANTHER OTU DOMAIN CONTAINING PROTEIN 33 323 - -
Vian2g02917 324 MobiDBLite consensus disorder prediction 1 69 - -
Vian2g02917 324 MobiDBLite consensus disorder prediction 117 144 - -
Vian2g02917 324 SUPERFAMILY Cysteine proteinases 140 323 IPR038765 -
Vian2g02917 324 CDD OTU_plant_OTU5-like 163 322 - -
Vian2g02917 324 Pfam OTU-like cysteine protease 178 318 IPR003323 -
Vian2g02917 324 Coils Coil 32 78 - -
Vian2g02917 324 FunFam Cysteine proteinases superfamily protein 158 323 - -
Vian2g02917 324 MobiDBLite consensus disorder prediction 123 144 - -
Vian2g02917 324 Gene3D - 158 323 - -
Vian2g02917 324 ProSiteProfiles OTU domain profile. 172 324 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02917 Vian-Chr2 49878966 49881081 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02917 K18342 - gmx:100780620 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02917 2 49878966 49881081 Vian2g02917 2 49878966 49881081 ECH