Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02915 ATGGACTTGAAACCATTGATTGCAGCCAAGCCAGTGGTGATCTTCAGCAAGAGCAATTGTTGCATGAGCCACACAGTACAGGCTCTGATACGCAGCTTTGGTGCCAACCATGCAGTTATTGAGGTTGACAAAATGGCATGTGGCCAACAACTAGAGAGTGCACTGCTCCAGCTAGGTTGCCGCCCCAGTGTGCCTGCAGTGTTCATAGGACAAGAATTCATAGGTGGTGCTGATGAAGTATTCAAACTAAATGTTCAGAACAAGCTTGCCCAATTGCTGTTCGAGGCTAAAGCCATATTTCTCTGA 306 0.4706 MDLKPLIAAKPVVIFSKSNCCMSHTVQALIRSFGANHAVIEVDKMACGQQLESALLQLGCRPSVPAVFIGQEFIGGADEVFKLNVQNKLAQLLFEAKAIFL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02915 101 CDD GRX_GRXh_1_2_like 11 92 - -
Vian2g02915 101 Gene3D Glutaredoxin 1 100 - -
Vian2g02915 101 PRINTS Glutaredoxin signature 12 30 IPR014025 -
Vian2g02915 101 PRINTS Glutaredoxin signature 57 70 IPR014025 -
Vian2g02915 101 PRINTS Glutaredoxin signature 71 84 IPR014025 -
Vian2g02915 101 Pfam Glutaredoxin 12 74 IPR002109 -
Vian2g02915 101 PANTHER GLUTAREDOXIN 4 100 IPR011905 -
Vian2g02915 101 ProSiteProfiles Glutaredoxin domain profile. 1 100 - -
Vian2g02915 101 SUPERFAMILY Thioredoxin-like 4 98 IPR036249 -
Vian2g02915 101 NCBIfam glutaredoxin-like family 6 100 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02915 Vian-Chr2 49870701 49871006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02915 2 101 Miscellaneous Gene Families AT4G15690 46.000 2.15e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02915 K03676 - gmx:100803979 152.14