Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02911 ATGGCTTCCTCTCATTCCCTCCACAACCACATAAACCGACTCGCTTCCGAACAGAGTCCTTACCTTCTCCAACACGCGCACAACCCTGTTGATTGGTATCCGTGGGGTGAAGAAGCCTTCGCCGAAGCGCGCAGGCGCGACGTGCCTATCTTCTTATCTACTTTGCCCGTGCTGTTCTTGACGGCGATTCTGTTCGAAGTTGGCTACAGCACTTGTCACTGGTGTCACGTTATGGAGGTCGAGTCTTTCGAAGACGCAGCGGTTGCAAAGTTGTTGAACGATTGGTTTGTTAGCATTAAGGTTGATCGAGAGGAACGACCAGATGTTGATAAGGTATACATGACGTATGTACAGGCTTTGTACGGTGGAGGAGGTTGGCCTCTGAGTGTGTTTCTTTCCCCCGACTTGAAGCCTTTAATGGGTGGAACTTACTTCCCCCCTGATGATAAGTACGGGCGACCTGGATTTAAGACTATACTAAGAAAAGTAAAACAGGCTTGGGATAGTAAGAGGGATATGCTGATTAAGAGTGGAGCATTTGCAATTGAACAGCTTTCTGAGGCAATGTCTGCTAGTGCAGATACTGATAAACTGCCCGATGAGGTTCCGGCTGATGCATTACGTCTGTGCTCAGAGCAGCTCTCTGGGTCCTATGATCCAAAGTTTGGTGGGTTTGGATCTGCACCGAAGTTTCCTAGACCAGTTGAGATAAACTTGATGCTTTATCACTCCAAAAAGTTGGAGGAGACAGGAAAATTGGATGGGGCTAATGGAAGTCAGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGCGGGATTCATGATCATATTGGAGGTGGCTTTCACAGATACAGCGTGGATGAGTGCTGGCACGTTCCACATTTTGAGAAGATGCTATATGATCAAGGGCAGCTTGCTAATGTTTATCTAGATGCGTTTTCTATCACTAAAGATAACTTCTATTCATATATATCACGGGGTATCCTTGACTATTTAAAGAGAGATATGATTGGTCCAGAGGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGGAAAGAAAAGAGGTTCAAGACATACTTGGAGAGCATGCTGCTCTTTTTGAGGAGCACTATTACATAAAGCAATCGGGTAACTGTGACCTGTCTGAGATGAGTGATCCTCACAATGAATTCAAAGAAAAGAATGTCCTAATTGAGAGAAAGGAACCTTCAGGACTGGCATCAAAATATGGCATGTCAGTTGAGACATATCAAGAAATTCTGGGAGAATGTAGGCGTAAGTTGTTTGAAGCAAGGTCAAGGCGTCCAAAGCCACATTTGGATGACAAGGTTATTGTATCTTGGAATGGATTGGCAGTCTCTTCTTTTGCCAGGTCTTCTAAGATTCTCAAGGGCGAAGCGGAAGGGTCCAAATTCTACTTTCCTGTTGTTGGCACTGAACCAAAGGAGTACTTGAAAATTGCAGAAAAAGCAGCATTTTTTATTAGGAAGCATCTTTATGATGTGGAGACTCGCAGGCTATACCATAGTTTCAGACGTTCTCCATCTAAAGCTCCTGGTTTCTTGGATGACTATGCTTTTCTGATTTCAGGATTGCTGGATCTGTATGAGTTTGGTGGTGGAATTAGCTGGCTTCTATGGGCCATTGAATTGCAGGAAACCCAGGATGCTTTGTTTCTTGATAAGGCTGGAGGTGGATATTTCAATAATACAGGAGAAGATTCTTCAGTTCTCCTCCGTGTGAAGGAAGATCATGATGGGGCAGAACCATCTGGAAACTCGGTTTCTGCCATAAACCTTATAAGATTGGCTTCCATGGTTTCTGGAAGTAAGGCTGAGAATTATAAGCGAAATGCAGAACATCTATTGGCAGTTTTTGAGAAAAGATTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGACATGTTGCGTGTACCTTCTAGGAAACAAGTTGTCGTGGTTGGTGGAAGGACGTCTGAAGAATTTGAAAACATGCTTGCCGCAGCTCATGCATTATATGACCCCAACAGAACAGTTATTCATATAGACCCCAGTAACAAAGAAGAGATGGAATTTTGGGAAGTAAATAACAACAATGTCTCTCTAATGGCAAAAAATAACTATGACGTCAACAAGGTTGTAGCTCTTGTTTGCCAAAACTTCACCTGTAGTCCCCCCTTGACTGATCCTTCTTCACTTGAAGCTTTACTCTCCAAAAAACCTTCCTCTTTGTTCACATAA 2310 0.4359 MASSHSLHNHINRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDVPIFLSTLPVLFLTAILFEVGYSTCHWCHVMEVESFEDAAVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKQAWDSKRDMLIKSGAFAIEQLSEAMSASADTDKLPDEVPADALRLCSEQLSGSYDPKFGGFGSAPKFPRPVEINLMLYHSKKLEETGKLDGANGSQKMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDNFYSYISRGILDYLKRDMIGPEGEIFSAEDADSAETEGAARKKEGAFYIWERKEVQDILGEHAALFEEHYYIKQSGNCDLSEMSDPHNEFKEKNVLIERKEPSGLASKYGMSVETYQEILGECRRKLFEARSRRPKPHLDDKVIVSWNGLAVSSFARSSKILKGEAEGSKFYFPVVGTEPKEYLKIAEKAAFFIRKHLYDVETRRLYHSFRRSPSKAPGFLDDYAFLISGLLDLYEFGGGISWLLWAIELQETQDALFLDKAGGGYFNNTGEDSSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVSGSKAENYKRNAEHLLAVFEKRLKDMAMAVPLMCCAADMLRVPSRKQVVVVGGRTSEEFENMLAAAHALYDPNRTVIHIDPSNKEEMEFWEVNNNNVSLMAKNNYDVNKVVALVCQNFTCSPPLTDPSSLEALLSKKPSSLFT 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02911 769 CDD SSP411 33 168 IPR004879 -
Vian2g02911 769 PIRSF UCP006402_thioredoxin 2 767 IPR024705 -
Vian2g02911 769 SUPERFAMILY Thioredoxin-like 12 151 IPR036249 -
Vian2g02911 769 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 3 763 IPR024705 -
Vian2g02911 769 SUPERFAMILY Six-hairpin glycosidases 213 607 IPR008928 GO:0005975
Vian2g02911 769 Gene3D - 495 701 IPR012341 GO:0005975
Vian2g02911 769 Gene3D Glutaredoxin 10 194 - -
Vian2g02911 769 Pfam Protein of unknown function, DUF255 62 184 IPR004879 -
Vian2g02911 769 Pfam Protein of unknown function, DUF255 12 53 IPR004879 -
Vian2g02911 769 FunFam spermatogenesis-associated protein 20 495 672 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02911 - - gmx:100777751 1402.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02911 2 49838774 49844548 Vian2g02911 2 49838774 49844548 ECH