Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02907 ATGGATCGAGGAGGAAGTGGGATTTTGATTGGGACGGAGGGTTCTCAATGCGGAGAAGGTAGGGATGCTATAAAGGGGCTGGGTTTAGGGTTGGGGTTAGGGCTGGGTGCTGGGAGGAGAGAGATGGTGGAGTCTGAGCTCGAAGAGGGTGAGGCGTGCTCCTTTCAGAACCACGAGGATTATGATGCCACCGTTGATCCCGATGTTGCCCTCTCTTACATTATCCGTGACCTGAATTTTGTTTCCGCGGTTGGCTTAAGTTGTTTAGTTGTGGGGTGTGCACTGCTGAATTGTGCTTTGCTTTTAGGAGTGCCCTTTACCCTTGATAGACTTGTACATAGTGTCATCCACTACGCCCCAAAGACCCGGAGAGTCAAGGATTTTGAGGGTGGGCTGTCTGCGGAAAGTCTTGGGGCAAAATATGGTGGTTATGGATCATTTTTGCCCACCTATCAGCGATCTCCTGTCTGGTCTCATCCAAGGACTCCACAAAAAAATCATAGTCAAAATACACCAAAATCTCCGAATAATTTGCTGCCAGAGGGTGGGCAGGGTGACGCTGTACAATGTTCCACTGGAACTCAGTCATCAAGACTTGGCCCAGGTTCTGGTAACTCTTTGAGGATGGCTGCAAACAAGGGTCTCTATCTGGAAGATGGAACCCATCAAGAAAAGTACTTGATAACCACTAATGTTGATACATCCACTTCTAAGCATGAGTCTCTAAACAAGAAATTTACTAGCACATCGGACCAGAAGCCACTGAAGGTTCGAATCAAAATGGGTCCAGATAATTTATCAACACGGAAAAATGCTGCAATATACAGTGAAATTGGTCTGGATGTGTCACCATCATCATCACTGGATGACAGTCCCTCAGAAAGTGAGGGGATTTCTCGTGATCCTCATGAAGCTCCTTTTGAATCTCCAACCATTATCCTTCAGATTATGACTGACCTCCCTCAGCTATTGTCACCACTTTCTGAAAGTATCATTGAATTAACTATAAAGGAAATGCGTGCCAGAGATAGCATTCCTGGTCTTGTTCATCTGGATGATGCAGAAAGTTTTGACATGTCACTAAATGAATCTAATAATGTGAAAGTAGATAGAAAATTGTCACGGGGGAGTGGTAGGAAAATGAAATCTCTGGAGGGTTGTGAATCCTCAATGGAAGTCAAGGGTTCTACAAAGAAGAATGGTCGGATTGATGCTGGAGTGTTGTCAAGAAAGGAACAAAGTACAGATGCATCAACTATGGAGGAGCTAGTTTCAAATACTATGAAGCTTCCACTTTTATCCAGTTCATATTCTTTCAGTGATGACTTGGTTAGGACTGATGATGGGCCGTGTGATTCTTTGAAGGAAACCCACAAAGTTATGGTGAGGGAGAAAACCTTCTCTGGTCAGGGTCAAAAGGAAGGGCTGGAGCCAACATCTACTGAGGTGAATGGTTTTTCTGAAAGGACAAAGGGAAGCTCAAGAAGAAAAGTTGTGGGAGATAAGATTCCTTTTGATGACTATATAGTGAAAGAAAATTCTCAAGGAGATAATAATTGCCACTCAATAATGGCTGAATCTAACGTTTCCAAAGTTAGGACAGCATCAAACACTGAAGAGCCTCCTAAGAAGGCTAATCAGAGAGGTAGCCTATGTGAACAAGACAGTATGGCAATACCTGTCGTGACAGAACATCCTGTTCTGGTTGGTAAGAAGAAGGCAAAGGGAAGTCATGACACCGTGGTTATGGAAAGGGAAAAAGAAAAGATTGGATCCTCATCGGCTCCTAAAACAAAAAGGAGTTCTGATGATAGTTCTGCATCAAAAAATGAGACTGAAGATGTTAGAGCACAAAAGAATCTCGGAAAGACTCGAGATACGTACAGAGATTTCTTTGGAGAATTGGAAGATGAGGAGGACAGAATCAATTCGCTGGAGACCCCATTTGAAGAAAAACCGAAGGAACCTGAGGTGGTTGAGAGGAGTGCACCTACAACTAGTTCTGGAGCAAAGGAGAGACCAAGTGCTAAGAAAGCTGATAAGCTGTTAACAGCTGAAATATACCCTAAATCAGCCACAAATATTTGGTGCACTGGAAATGCAAATGGTACTGATGCTGAGAGTGGAAAAGGGATTCCTGTAATGATACCCCCCGTTGAGATGGAAGATAATTGGGTGCAATGTGACAGATGTCATAAATGGCGTCTTCTTCCTGTTGGAACAAATCCTGATAACCTACCCGAAAAGTGGCTATGTAGTATGCTTAATTGGCTGCCGGACATGAATCGATGTAGCTTTAGTGAGGATGAAACCACTAAAGCACTTATTGCATTATACCAAGGGCCTCCTTTTGACGGTCAAAGCAACCTGCAAAATGTCTCTGGCAGTGTTATGGTGGGAGGAGCCATGCCAACATCCCAGCATCCTAACCAGCACCAGCTAAATAATGATGTGCATGTGGCACCTGGGGGGAAGAAAAGGTTAAATTCTACAAATAAAGAAAACTTTTCTCAATCCTCATATCCTATGAAGAAAAACTTGTTGTCAACAGTGAAAAGTAGGAGTTTAAATGATGTGAACAAATCTCCTGTCATGAGTGAGGCTGATGTTCCATCAGAGAAACACAAAAATAAGCACAGGACGCAGGAGCACAGTTCTGATAGAGGTGATACAAAGAATACGAAGGTCAAAAGCAGGAGGGATCATGATCAAGATTTTCCTAGGCCATCCAAGAAATCTAAGACTGACAAGGCTCATTCTACCAATGAAGAGTGGGTAGAACAGAGCGGAACTACTAGGAAGGTGGGTGTTCAAAGTTCAAATAGCACTTTTCCAACTACTTCAGTTGGCAAAGATCGACCAAGACAGAAAGCCCACTCTTCTTCAAGGGACTCCAAATCAAGAAAAGACAGGATTCCAGTTTCTGCTGAAAACACAAGAGATAAAGGTCAGGGTTCGTTGGATGAGGGATCTCTGGATCTGGGGAATTGTGATTCAATTGGTAGTGTGAAAAAAAGGAAACTTAAGGGATATCAGGATGCTATAACTTACAGCCCAGGTAATCCTCGCATACAGGAGAGCAAAACTTCTGAGCATGATTTCAGCAATTCAAGGAAGGAAAAGAAGGCGAAAAGTTCAAAATCTGGAGGCAAAGAATCAAGTACCAGTAAAGGTAGTGGTAGGACTGACAAAAAAGTTAGTCATGCAAAGAACCAGAAATTCAGGCAAAACCCTGAGTGCAGTCTGTCACAGCGGAGCTTGGATGGCATGGACTGTTCAAAAAGGGACTTGGGACCTTTACAGGTTTCTGTTGCTGCCACTTCAAGCTCTTCTAAGGTTTCTGGCTCTCACAAAACCAAAGCCAGCTTCCACGAAGTGAAGGGCTCACCTGTGGAATCGGTGTCTTCATCACCCATTCGAGTTTTAAATGCAGATAAGCTTTCAATCAAGGAAATTATAGGGAAAGATGATTCACGTGATGTTGCTGCTGTGGATAGTCCAAGAAGATGCTTGAATCGTGATGATGATGGTGCAAGTGATCGATCTGGAACGGCCAGGAAGGATAAATCTTTCACCATTGCCAACAGGGCAGATTTTCAGGACAAGGGTGTTAATTTTTCTGATACGAAGCTTAAAGCTGAAACAACCAGCTATTGTACAAATGGTGGTGTTGACACCATAGTTCCAGATGGGACCTATGCAGGCAAAGAGCATATTAAACATCCAGGTGAAGACAAAATTGATGTTTATCATGCTAATATGTCTCATACAAGGAAGAATGGCATAGAATCAGGTTTGGAGGACAACAATGACGGCTGTAAGTCAGAGTCCCATGCAGATAAGGTCAAGAATTCTAGTTCTTCAAGTCAACTGAAAAATCAGTCTCCTCTAGCTGAGACAAAGCATAAGGATGGAAAAAATAAGTTGCAGGAGAAGTTTGGGATCAAGCCTGACCAAAGTGAGAATATACATGCTGTCAAGAAAGATTATGCAGAGAAAGCTGAGGCTAGGAAAAAAGAGAGTCACTTAAATCGAGGTCATGACTTTCAAGATGTTATTGTGGATGCCCTTTGCAAACAGGATGCATTTCATGCTCCCCCGCAGACTCAGTTGCCAGACTCGGATAGATCCACAAAGAGGTCTCTTTTTGAAAGAACTGGTGATCAAGAAGTGCATGGAAAAGGGAAGCTGTTGTCATCATTGCCATCTGAAGGATCTCAAGTTGAGACATTGGGCCGATGCCCACGGCCAGTTGGTTTACATAAAGGAAATGGTGATGCTGAAGTTGACCCTTCCAAAGTCGATGATGTGTCAAAGCTACCAAAAAGGCAATCGAAAAAGACTGACAATCAAAATGGAAATCAGCAAACTGGTTCAAGAAATCCCGTACTTAATGGTCACAGGTCGAAGGAGCTTGATGCCCCTAGCCCAGTTAGAAGGGATTCTTACAGCCATGCTGCTAACAATGCTGTGAAAGAAGCTAAAGATCTTAAGCATCTGGCTGATCGTCTTAAGCATTCTGGATCCACTGGTGAGAGCACTAGTCTTTACTTCCAGGCAGCCCTCAAATTTCTTCACGGAGCCTCTCTGTTAGAATCTGGCAACAGTGATAATTCTAAACACAGTGAGATGATTCAATCAAAACAAATGTATAGTAGCACTGCAAAATTGTGCGAGTTGCAAGCATGCCTTCAAACATCTTTACTGTTTTGTGCCCACGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCACTAGCCTACAAATGCATGGAGGTAGCATATATGAGGGTAGTATATTCTTCACACACTAGTGCAAGCAGAGATCGGCATGAGTTGCACAATACACTGCAAATGATTCCTCTTGGTGAGTCTCCATCGTCATCTGCCTCTGATGTTGACAATGTTAACAACTCTACAGCTGCTGACAAGGTTGTCATCATATCTAAGAGTGTCAATTCGCCCCAAGTAGCTGGAAACCATGTTATTGCTGCACGACATCGTCCTAATTTTGTGCGATTGCTCGGTTTTGCTGTGATATTTGGAATTAAAAACATGTACCAATTGCAGGCTCAGGATGTTACTTTTGCCATGGAAGCATCAAGGAAATCACGGAATGCTTTTGCAGCTGCTAATTCAAGCCTAGGTGTGGGCAAGAATACAGATGGTATCTCCTCTATCAAAAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTTCGTTTGGTACGGGTTGCTGTGGAGGCCATTAATCGTGAAGCTAGTACTGTCTCTATAGATATGGCTGCTGTGGACAGTGAAATGAAAGTCTCAGTTTACAGTCAGGAATTTGGTTGCTCTCTGTTGTTTACAAACATAAAATCCTTTCAATCCTCGAGACAACGTGGAGGCCCTCAGAAGCAAGTTGTAACTGCTGGAAAGAGGAAGTTGTGGATTTTGTATTACTGCAATCATGCTTCTACTAGTGGTTCTGCATTTTCTTCCCCTTTCCAATCTCTTCCCGGAAAGTTCTCTTGTACAATGTTGGGATTAGGGGTAGAACAATATTCTTTACTCATTTTGTTGATAGAGTACCAAGCAGAAAATAAAAAAGGAGAGATGTACAGCAAGAATTTTTTTGAAGTGGCAGGCAATTTACTGCAAATGAATTGTCAACTCAGGTTTGAGCAACTGAGGCAAATACCAGATAGACCTGGAGTTTAG 5709 0.4291 MDRGGSGILIGTEGSQCGEGRDAIKGLGLGLGLGLGAGRREMVESELEEGEACSFQNHEDYDATVDPDVALSYIIRDLNFVSAVGLSCLVVGCALLNCALLLGVPFTLDRLVHSVIHYAPKTRRVKDFEGGLSAESLGAKYGGYGSFLPTYQRSPVWSHPRTPQKNHSQNTPKSPNNLLPEGGQGDAVQCSTGTQSSRLGPGSGNSLRMAANKGLYLEDGTHQEKYLITTNVDTSTSKHESLNKKFTSTSDQKPLKVRIKMGPDNLSTRKNAAIYSEIGLDVSPSSSLDDSPSESEGISRDPHEAPFESPTIILQIMTDLPQLLSPLSESIIELTIKEMRARDSIPGLVHLDDAESFDMSLNESNNVKVDRKLSRGSGRKMKSLEGCESSMEVKGSTKKNGRIDAGVLSRKEQSTDASTMEELVSNTMKLPLLSSSYSFSDDLVRTDDGPCDSLKETHKVMVREKTFSGQGQKEGLEPTSTEVNGFSERTKGSSRRKVVGDKIPFDDYIVKENSQGDNNCHSIMAESNVSKVRTASNTEEPPKKANQRGSLCEQDSMAIPVVTEHPVLVGKKKAKGSHDTVVMEREKEKIGSSSAPKTKRSSDDSSASKNETEDVRAQKNLGKTRDTYRDFFGELEDEEDRINSLETPFEEKPKEPEVVERSAPTTSSGAKERPSAKKADKLLTAEIYPKSATNIWCTGNANGTDAESGKGIPVMIPPVEMEDNWVQCDRCHKWRLLPVGTNPDNLPEKWLCSMLNWLPDMNRCSFSEDETTKALIALYQGPPFDGQSNLQNVSGSVMVGGAMPTSQHPNQHQLNNDVHVAPGGKKRLNSTNKENFSQSSYPMKKNLLSTVKSRSLNDVNKSPVMSEADVPSEKHKNKHRTQEHSSDRGDTKNTKVKSRRDHDQDFPRPSKKSKTDKAHSTNEEWVEQSGTTRKVGVQSSNSTFPTTSVGKDRPRQKAHSSSRDSKSRKDRIPVSAENTRDKGQGSLDEGSLDLGNCDSIGSVKKRKLKGYQDAITYSPGNPRIQESKTSEHDFSNSRKEKKAKSSKSGGKESSTSKGSGRTDKKVSHAKNQKFRQNPECSLSQRSLDGMDCSKRDLGPLQVSVAATSSSSKVSGSHKTKASFHEVKGSPVESVSSSPIRVLNADKLSIKEIIGKDDSRDVAAVDSPRRCLNRDDDGASDRSGTARKDKSFTIANRADFQDKGVNFSDTKLKAETTSYCTNGGVDTIVPDGTYAGKEHIKHPGEDKIDVYHANMSHTRKNGIESGLEDNNDGCKSESHADKVKNSSSSSQLKNQSPLAETKHKDGKNKLQEKFGIKPDQSENIHAVKKDYAEKAEARKKESHLNRGHDFQDVIVDALCKQDAFHAPPQTQLPDSDRSTKRSLFERTGDQEVHGKGKLLSSLPSEGSQVETLGRCPRPVGLHKGNGDAEVDPSKVDDVSKLPKRQSKKTDNQNGNQQTGSRNPVLNGHRSKELDAPSPVRRDSYSHAANNAVKEAKDLKHLADRLKHSGSTGESTSLYFQAALKFLHGASLLESGNSDNSKHSEMIQSKQMYSSTAKLCELQACLQTSLLFCAHEYEKSKDMASAALAYKCMEVAYMRVVYSSHTSASRDRHELHNTLQMIPLGESPSSSASDVDNVNNSTAADKVVIISKSVNSPQVAGNHVIAARHRPNFVRLLGFAVIFGIKNMYQLQAQDVTFAMEASRKSRNAFAAANSSLGVGKNTDGISSIKKALDFSFQDVEGLLRLVRVAVEAINREASTVSIDMAAVDSEMKVSVYSQEFGCSLLFTNIKSFQSSRQRGGPQKQVVTAGKRKLWILYYCNHASTSGSAFSSPFQSLPGKFSCTMLGLGVEQYSLLILLIEYQAENKKGEMYSKNFFEVAGNLLQMNCQLRFEQLRQIPDRPGV 1902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1057 1072 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1073 1088 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1260 1323 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1447 1464 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1377 1392 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 467 495 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 868 923 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1364 1482 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1102 1117 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 828 862 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1282 1296 - -
Vian2g02907 1902 Coils Coil 1487 1507 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 155 178 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 602 638 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 800 817 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1158 1189 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1426 1446 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1297 1323 - -
Vian2g02907 1902 ProSiteProfiles Zinc finger CW-type profile. 719 772 IPR011124 GO:0008270
Vian2g02907 1902 Gene3D - 716 774 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 952 987 - -
Vian2g02907 1902 PANTHER CW-TYPE ZINC FINGER 40 1754 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 472 488 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1261 1281 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 569 594 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 1026 1048 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 281 305 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 569 678 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 924 950 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 155 206 - -
Vian2g02907 1902 Pfam CW-type Zinc Finger 724 770 IPR011124 GO:0008270
Vian2g02907 1902 MobiDBLite consensus disorder prediction 187 203 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 645 659 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 528 551 - -
Vian2g02907 1902 MobiDBLite consensus disorder prediction 800 1134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02907 Vian-Chr2 49802656 49814174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02907 - - var:108328921 3152.84