Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02898 ATGGCATCATATGGTATCGGTTACCCCCTTCTTGTTCTTGGTCTAATTTCTTTAGTGAAATCTGCCACGGAGACTGGCGATTTATTCTGCCGGGATCTAGAGGAAGACGACATACCTGTTGCTCTACGTGTGGCCGCCGATGATCAAGGTTCCATGTTGAAAACAGTTCTTCCAGAAATTTGGAGTTTTGGTTTATTGCTTTTGCCACAAATCACGATGCATGGAGACAATGAGTGGTGGACCCGTTATCGTGTGGGTTGCAGTCCCAGTGAGCTCTGCTTTTGGGATCAGAAAATGAGCGGTGACATGGCTTCCGCACCAAATGAAATGAGTGCTCTGATTCCTTTTTTTTTGTACCAAACCTACCAAATGGCAGCAAAGCCTGCAGAAGAACCTCCTCATGGAGAAACTCTCAAGTACCAGACGTGGGTTCTCAAAGTATTGATCCACTGCGAAGGCTGCAAAAAGAGAGTCAAGAAAATTCTTCAAGGAATTGATGGGGTTTATAAAACAGAGGTGGATTCTCTGCAGCACAAGGTTACGGTCACTGGTAACGTGGACGCCGAGACTCTCATCAAGAGGCTTTCAAGATCAGGGAGGCTAGTGGAGCTTTGGCCAGAGAAACCAGCTGAGAAGAAAGATAATAAAAAGTCGGGAAAATCCAGTAAGGGTGGTGATATCAACAAGGAGAAGGAAAACCAAAAGAATGGTGAACCAGGTGCTGATGCTGGTTCAAACGAGGGTTCTAAAGATGGTGCCGGTGTTGGTGAAGATTCCGAGAAAGAAGAACACAGTGATGAATGTGAGGAGGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGAAGGTGGCAAAAAGAAGAAAAAGAAAAAGAAGAAGAAGAACAACGGGGAAAACGGTGGTTCTGCATCTGTTCCTCCTAAGAATGGAGAAATTAGTAAAGTTGATGCATCGGTGGCTTCAAATTTGGGGACTTCAATGGCTGCGAAGGATCTTGTTAACCCTCCAATTCAGCATGCCTACCCTTATCCACATGTGTATTATTCACCTCCTCCTGCTCCTCCAGCTTATGGATTAAGCTATAACACAGCATATCCTATCTCAAGTGCTTCATATTATGTCGGGGCACCCATCATGCCCATGCATGCTTACGCCACTCCATACTCTAGACTGCCACCACCTCCTCCACCGTCTGATCCGATCAAGCACTATGGTGCAGATGATGATGATGAGGATGAGTACGGAGGTGGTGGATATTGCTCCATCATGTGA 1272 0.4638 MASYGIGYPLLVLGLISLVKSATETGDLFCRDLEEDDIPVALRVAADDQGSMLKTVLPEIWSFGLLLLPQITMHGDNEWWTRYRVGCSPSELCFWDQKMSGDMASAPNEMSALIPFFLYQTYQMAAKPAEEPPHGETLKYQTWVLKVLIHCEGCKKRVKKILQGIDGVYKTEVDSLQHKVTVTGNVDAETLIKRLSRSGRLVELWPEKPAEKKDNKKSGKSSKGGDINKEKENQKNGEPGADAGSNEGSKDGAGVGEDSEKEEHSDECEEGGGGGGGGGGGEGGKKKKKKKKKKNNGENGGSASVPPKNGEISKVDASVASNLGTSMAAKDLVNPPIQHAYPYPHVYYSPPPAPPAYGLSYNTAYPISSASYYVGAPIMPMHAYATPYSRLPPPPPPSDPIKHYGADDDDEDEYGGGGYCSIM 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02898 423 MobiDBLite consensus disorder prediction 203 312 - -
Vian2g02898 423 Pfam Heavy-metal-associated domain 149 199 IPR006121 GO:0046872
Vian2g02898 423 MobiDBLite consensus disorder prediction 253 270 - -
Vian2g02898 423 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 138 423 - -
Vian2g02898 423 ProSiteProfiles Heavy-metal-associated domain profile. 140 203 IPR006121 GO:0046872
Vian2g02898 423 MobiDBLite consensus disorder prediction 203 237 - -
Vian2g02898 423 CDD HMA 149 199 IPR006121 GO:0046872
Vian2g02898 423 MobiDBLite consensus disorder prediction 389 423 - -
Vian2g02898 423 SUPERFAMILY HMA, heavy metal-associated domain 140 205 IPR036163 GO:0046872
Vian2g02898 423 Gene3D - 138 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02898 Vian-Chr2 49742736 49747181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02898 - - gmx:100791626 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02898 2 49742736 49747181 Vian2g02898 2 49742736 49747181 ECH