Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02891 ATGGCTTCCAATGACCTCAAACATCGACTCACACCGCATCCAGACACCGCCGCCAACGACAACGGGATGATCGGAGACAAACGCCAGAAACGAAAGATGATGGCCAAACGCGGCCTAAAGTCACTCGCCATAGCTGTTACCCTACCGTTCTTGCTCACCGTCTTATCAGCATGCATAGGCTCCTCCATCACCGCTGATGATTCTCTCTCAACCAGAAGACCCTTCTGGTTCCCACCCTCCTGGGCCGTGCACTTCACCTGCCCCGCCATAAGCTTGTTGATGGGTATGGCCGCCTGGATGGTCTGGGCAGAAGGAGGTTTCCACCGAAACCGCATGGCTCTGTTGTTTTACTTCACTCAAATCCTTTTCGCGGTGCTCTGGGATCCCCTTGTGTTTGCTGCTGGGGCCACACGGCTCAGCCTGATGCTCTGTTTAGGGTTGTTCGTGAGCCAGTACGGGTGCATGCTTGTGTTTCGCTCCGTCAATCCCATTGCTGCTGATTTGATAAAGCCTTCTCTGGCATGGGTTGCTTTTCTATCTATTGTAAATATTAAGCTCCTTTTTATCTGA 570 0.5228 MASNDLKHRLTPHPDTAANDNGMIGDKRQKRKMMAKRGLKSLAIAVTLPFLLTVLSACIGSSITADDSLSTRRPFWFPPSWAVHFTCPAISLLMGMAAWMVWAEGGFHRNRMALLFYFTQILFAVLWDPLVFAAGATRLSLMLCLGLFVSQYGCMLVFRSVNPIAADLIKPSLAWVAFLSIVNIKLLFI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02891 189 Gene3D TspO/MBR protein 37 188 IPR038330 -
Vian2g02891 189 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 34 187 IPR004307 GO:0016020
Vian2g02891 189 Pfam TspO/MBR family 47 187 IPR004307 GO:0016020
Vian2g02891 189 CDD TSPO_MBR 46 187 IPR004307 GO:0016020
Vian2g02891 189 PIRSF PBR 31 189 IPR004307 GO:0016020
Vian2g02891 189 MobiDBLite consensus disorder prediction 1 23 - -
Vian2g02891 189 FunFam translocator protein 2 38 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02891 Vian-Chr2 49693655 49694224 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02891 K05770 - gmx:100785785 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02891 2 49693655 49694224 Vian2g02891 2 49693655 49694224 ECH