Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02890 ATGTTACAAAAGTGTTTGGGAGCTCAAAGGGCGCGAAAATTCCAGAGAGCTCTCAGGCATTGCAAGGTCACCATCCTCTGTCTGCTCCTCACCATCGTTGTCCTGCGCGGCACCATCGGTGCTGGAAAATTCGGCACGCCGGAGCAGGACTTCATCGACATTCGCAACCGTTTCTACTCCCGCAAGCTCCCTGAGAACGATCGCCACCTTGGTGAGCTTCAATCCACGACGTCCAACGATTCCAATTCCATCACCGACTACAATGCCTTTGACATCAACACCATATTGGTCGACGAACCAGAAGACGTGAACCGCGAGAAATTGAACCCGGAAGAGCCGTATCGTCTCGGCCCCAAAATATCGACCTGGGACCAGCAACGATCTCGCTGGCTTCGCAATAACCCCAATTTATCAAATTTCGTTCGGCCCAACAAGCCTCGTGTTCTTCTGGTAACTGGGTCATCGCCGAAACCCTGCGAGAATCCCGTTGGGGATCATTACTTGTTGAAGTCAATTAAGAACAAAATTGACTATTGTCGTTTGCATGGGATTGAGGTGTTTTACAACATGGCTCTCCTTGACGCTGAGATGGCAGGGTTCTGGACCAAACTTCCTTTGATTCGGAAGCTTCTTTTGTCTCACCCTGAGCTGGAGTTTATATGGTGGATGGATAGTGATGCCATGTTCACGGACATGGCGTTTGAGGTGCCGTGGGAGAGGTATAAAGACCATAACTTGGTGATGCATGGGTGGGATAAAATGGTTTATGATGAAAAGAATTGGATTGGGCTGAACACTGGGAGTTTTCTGCTGAGAAATTGCCAGTGGTCTTTGGATATTCTCGATGCTTGGGCTCCAATGGGGCCTAAAGGGAGGGTTAGGGATGAGGCTGGGAAAGTGCTGACGCGTGAGCTCAAGGATAGACCTGTTTTCGAAGCTGATGATCAATCTGCCATGGTTTATCTGCTGGCTAAGGATAGAGACAAATGGGGTGATAAAGTTTATCTCGAGAACGATTATTACTTGCATGGTTATTGGGGGATTTTGGTTGATAAGTACGAGGAAATGATTGAGAATTACCATCCTGGTCTCGGGGATCATAGGTGGCCATTGGTGACTCATTTTGTGGGGTGCAAGCCTTGTGGGAAGTTTGGGGATTACCCTGTTGAGAGGTGCTTGAAGCAGATGGATAGGGCCTTCAATTTTGGGGATAATCAGATTTTGCAGATTTATGGATTTACGCATAAGTCGTTGGCTAGTAAAGAAGTCAAGAGAATACGGGAGGAGACTAGCAATCCCCTTGAAGACAAGGATGAAGTTGGGTTGCTTCATCCAAACATTTAA 1344 0.4769 MLQKCLGAQRARKFQRALRHCKVTILCLLLTIVVLRGTIGAGKFGTPEQDFIDIRNRFYSRKLPENDRHLGELQSTTSNDSNSITDYNAFDINTILVDEPEDVNREKLNPEEPYRLGPKISTWDQQRSRWLRNNPNLSNFVRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEVFYNMALLDAEMAGFWTKLPLIRKLLLSHPELEFIWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWDKMVYDEKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGRVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKDRDKWGDKVYLENDYYLHGYWGILVDKYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLASKEVKRIREETSNPLEDKDEVGLLHPNI 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02890 447 FunFam xyloglucan 6-xylosyltransferase 2 144 295 - -
Vian2g02890 447 Pfam galactosyl transferase GMA12/MNN10 family 145 384 IPR008630 GO:0016020|GO:0016757
Vian2g02890 447 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 144 294 IPR029044 -
Vian2g02890 447 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 6 439 IPR008630 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02890 Vian-Chr2 49689020 49690363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02890 1 445 Glycosyltransferase AT4G02500 78.540 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02890 K08238 - gmx:100794266 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02890 2 49689020 49690363 Vian2g02890 2 49689020 49690363 ECH