Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02889 ATGGATTTGATGTGTCATTGTTCGAATTTTCTTCTTTCGCCGGAGAACCCCAACGCGGCGTGTTCTCTTTCTCTGAACTACGCTCTCGTTATTCTCAATCAGAGTCTTCCGAGATTTGCTCCTCTGCTCTGGGACCACGCTCATGTGCGAGTGTGCGCCGATGGAGGTGCCAATAGGGTGTATGATGAAATGCCTCTTTTCTTCCCGCATCAACAACCTTCCCATGTTCGCTCCAGGTACAAGCCTGATGCAATTAAAGGAGACATGGATTCAATACGGAAAGAAGTACTTGACTTCTATGCAAAACTGGGAACTAAGATAATTGATGAGTCGCATGATCAGGACACCACAGATTTACACAAATGTGTCATATACATACGTGACCTCAGCCCAAAGATTGATGGATCAGAGCAATGCATTCTAGTTGCTGGAGCACTTGGTGGGAGATTCGACCATGAGATTGGAAATATTAATGTTCTGTGTCGATTTCCCAACACACGGATTATCCTTCTATCTGATGATTGCCTCATTCATCTTCTTCCAAAGAATCGGTATCATAAAATCTTTATTCAATCTTCTGTTGAGGGTCCCCATTGTGGACTCATTCCAATTGGGATGCCGTCTGGAAGCTCTACAACCACAGGACTCAAATGGGACCTCAATGAGACGGCAATGAGATTTGGAGGTTTAATAAGCACATCGAATATTGTAAAAGGAGAAATAGTTACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCTATCAAGAAGCCTTAG 780 0.4321 MDLMCHCSNFLLSPENPNAACSLSLNYALVILNQSLPRFAPLLWDHAHVRVCADGGANRVYDEMPLFFPHQQPSHVRSRYKPDAIKGDMDSIRKEVLDFYAKLGTKIIDESHDQDTTDLHKCVIYIRDLSPKIDGSEQCILVAGALGGRFDHEIGNINVLCRFPNTRIILLSDDCLIHLLPKNRYHKIFIQSSVEGPHCGLIPIGMPSGSSTTTGLKWDLNETAMRFGGLISTSNIVKGEIVTVQSDSDLLWTISIKKP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02889 259 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 186 251 IPR007373 GO:0009229|GO:0030975
Vian2g02889 259 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 178 258 IPR036371 GO:0009229
Vian2g02889 259 SMART TPK_B1_binding_a_2_a 186 250 IPR007373 GO:0009229|GO:0030975
Vian2g02889 259 NCBIfam thiamine diphosphokinase 29 254 IPR006282 GO:0004788|GO:0006772
Vian2g02889 259 Gene3D Thiamin pyrophosphokinase, catalytic domain 25 168 IPR036759 GO:0004788|GO:0005524|GO:0009229
Vian2g02889 259 FunFam Thiamine pyrophosphokinase 169 258 - -
Vian2g02889 259 Gene3D - 169 258 - -
Vian2g02889 259 FunFam Thiamine pyrophosphokinase 25 167 - -
Vian2g02889 259 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 26 176 IPR036759 GO:0004788|GO:0005524|GO:0009229
Vian2g02889 259 PANTHER THIAMIN PYROPHOSPHOKINASE 5 257 - -
Vian2g02889 259 Pfam Thiamin pyrophosphokinase, catalytic domain 42 167 IPR007371 GO:0004788|GO:0005524|GO:0009229
Vian2g02889 259 PIRSF TPK1 4 259 IPR016966 GO:0004788|GO:0005524|GO:0009229
Vian2g02889 259 CDD TPK 28 254 IPR007371 GO:0004788|GO:0005524|GO:0009229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02889 K00949 - gmx:100795320 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02889 2 49682494 49685943 Vian2g02889 2 49682494 49685943 ECH